RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	CFAP100	Q494V2	611 aa		11.63	□□□□□ -0.55
UBC-213	ENST00000546120	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.63	□□□□□ -0.55
UBC-213	ENST00000546120	SULT6B1	Q6IMI4	303 aa		11.63	□□□□□ -0.55
UBC-213	ENST00000546120	SYNE3	Q6ZMZ3	975 aa		11.63	□□□□□ -0.55
UBC-213	ENST00000546120	DHX32	Q7L7V1	743 aa	Known RBP	11.63	□□□□□ -0.55
UBC-213	ENST00000546120	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.63	□□□□□ -0.55
UBC-213	ENST00000546120	CNPY4	Q8N129	248 aa		11.63	□□□□□ -0.55
UBC-213	ENST00000546120	CNNM3	Q8NE01	707 aa		11.63	□□□□□ -0.55
UBC-213	ENST00000546120	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.63	□□□□□ -0.55
UBC-213	ENST00000546120	SMARCC1	Q92922	1105 aa	Predicted RBP	11.63	□□□□□ -0.55
UBC-213	ENST00000546120	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	DLG5	Q8TDM6	1919 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	NCAPD2	Q15021	1401 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	FAM83G	A6ND36	823 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120		H3BQF6	201 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	WDHD1	O75717	1129 aa	Predicted RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	KIAA0754	O94854	1291 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	OS9	Q13438	667 aa	Predicted RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	STK38	Q15208	465 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	ZNF662	Q6ZS27	426 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	PRPF38A	Q8NAV1	312 aa	Known RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	LINC00301	Q8NCQ3	95 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	C1orf131	Q8NDD1	294 aa	Known RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	ENOX1	Q8TC92	643 aa	Known RBP	11.62	□□□□□ -0.55
UBC-213	ENST00000546120	P3H4	Q92791	437 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	CCDC102A	Q96A19	550 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	IL25	Q9H293	177 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	C19orf44	Q9H6X5	657 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	IL1RAPL2	Q9NP60	686 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	SUFU	Q9UMX1	484 aa		11.62	□□□□□ -0.55
UBC-213	ENST00000546120	XRN1	Q8IZH2	1706 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	MAP2	P11137	1827 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	WASL	O00401	505 aa	Predicted RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	PES1	O00541	588 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	SPTLC2	O15270	562 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	FSBP	O95073	299 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	ZNF202	O95125	648 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	FECH	P22830	423 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	ERCC5	P28715	1186 aa	Predicted RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	INPP5B	P32019	993 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	IRX1	P78414	480 aa	Predicted RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	IFFO1	Q0D2I5	559 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	EIF4A2	Q14240	407 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	MCM6	Q14566	821 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	WASHC4	Q2M389	1173 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	TSHZ3	Q63HK5	1081 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	TMTC1	Q8IUR5	882 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	TMEM139	Q8IV31	216 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	CNGA4	Q8IV77	575 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	FAM76A	Q8TAV0	307 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	ESF1	Q9H501	851 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	ANKZF1	Q9H8Y5	726 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	GNL3L	Q9NVN8	582 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	BSDC1	Q9NW68	430 aa	Predicted RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	PCDHA7	Q9UN72	937 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	FAN1	Q9Y2M0	1017 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	USP31	Q70CQ4	1352 aa		11.61	□□□□□ -0.55
UBC-213	ENST00000546120	SETD1B	Q9UPS6	1966 aa	Known RBP	11.61	□□□□□ -0.55
UBC-213	ENST00000546120	WDR17	Q8IZU2	1322 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	WDR19	Q8NEZ3	1342 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	NPHP4	O75161	1426 aa	Predicted RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120		A0A1B0GUA9	196 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	ANKRD18B	A2A2Z9	1011 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120		F6X3S4	739 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	EPB41	P11171	864 aa	Known RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	HNRNPH1	P31943	449 aa	Known RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	HDGF	P51858	240 aa	Known RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	ITIH3	Q06033	890 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	CRYM	Q14894	314 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	TAF7	Q15545	349 aa	Predicted RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	NBPF14	Q5TI25	921 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	EMC10	Q5UCC4	262 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	ALS2CL	Q60I27	953 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	G2E3	Q7L622	706 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	RASGRP2	Q7LDG7	609 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	UBE3B	Q7Z3V4	1068 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	GPATCH11	Q8N954	259 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	NSUN7	Q8NE18	718 aa	Known RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	FMNL2	Q96PY5	1086 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	NAPG	Q99747	312 aa	Predicted RBP	11.6	□□□□□ -0.55
UBC-213	ENST00000546120	CRACR2A	Q9BSW2	395 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	GOLPH3L	Q9H4A5	285 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	FAM204A	Q9H8W3	233 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	BATF3	Q9NR55	127 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	AKAP2	Q9Y2D5	859 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	ALK	Q9UM73	1620 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	AGL	P35573	1532 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	ITIH6	Q6UXX5	1313 aa		11.6	□□□□□ -0.55
UBC-213	ENST00000546120	PPFIA3	O75145	1194 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	TAF5L	O75529	589 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	HSP90B1	P14625	803 aa	Known RBP	11.59	□□□□□ -0.55
UBC-213	ENST00000546120	MRPL12	P52815	198 aa	Known RBP	11.59	□□□□□ -0.55
UBC-213	ENST00000546120	SEMA3F	Q13275	785 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.59	□□□□□ -0.55	2e-7	■■■■□ 21.1
UBC-213	ENST00000546120	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.59	□□□□□ -0.55
UBC-213	ENST00000546120	DPCR1	Q3MIW9	517 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	FILIP1L	Q4L180	1135 aa		11.59	□□□□□ -0.55
UBC-213	ENST00000546120	CCDC102B	Q68D86	513 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms