RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ANGEL2Q5VTE6 544 aaKnown RBP21.33■■□□□ 1.01
CD9-211ENST00000546073 APOBEC3FQ8IUX4 373 aaKnown RBP21.33■■□□□ 1.01
CD9-211ENST00000546073 MTMR14Q8NCE2 650 aa21.33■■□□□ 1.01
CD9-211ENST00000546073 GGA3Q9NZ52 723 aa21.33■■□□□ 1.01
CD9-211ENST00000546073 HMG20BQ9P0W2 317 aa21.33■■□□□ 1.01
CD9-211ENST00000546073 PGAP2Q9UHJ9 254 aa21.33■■□□□ 1.01
CD9-211ENST00000546073 A0A1B0GUL6 1792 aa21.33■■□□□ 1
CD9-211ENST00000546073 NF2P35240 595 aa21.32■■□□□ 1
CD9-211ENST00000546073 TNNI2P48788 182 aa21.32■■□□□ 1
CD9-211ENST00000546073 HIRAP54198 1017 aaPredicted RBP21.32■■□□□ 1
CD9-211ENST00000546073 TNFAIP1Q13829 316 aa21.32■■□□□ 1
CD9-211ENST00000546073 PITPNM2Q9BZ72 1349 aa21.31■■□□□ 1
CD9-211ENST00000546073 WNT10BO00744 389 aa21.31■■□□□ 1
CD9-211ENST00000546073 APLP1P51693 650 aa21.31■■□□□ 1
CD9-211ENST00000546073 HHIPL2Q6UWX4 724 aa21.31■■□□□ 1
CD9-211ENST00000546073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.31■■□□□ 1
CD9-211ENST00000546073 HSPA6P17066 643 aa21.3■■□□□ 1
CD9-211ENST00000546073 NBPF9Q3BBW0 867 aa21.3■■□□□ 1
CD9-211ENST00000546073 USP48Q86UV5 1035 aa21.3■■□□□ 1
CD9-211ENST00000546073 VEZTQ9HBM0 779 aa21.3■■□□□ 1
CD9-211ENST00000546073 SNRKQ9NRH2 765 aa21.3■■□□□ 1
CD9-211ENST00000546073 TLR7Q9NYK1 1049 aaKnown RBP21.3■■□□□ 1
CD9-211ENST00000546073 SPDYE2BA6NHP3 402 aa21.29■■□□□ 1
CD9-211ENST00000546073 ERC2O15083 957 aa21.29■■□□□ 1
CD9-211ENST00000546073 SMARCA5O60264 1052 aaPredicted RBP21.29■■□□□ 1
CD9-211ENST00000546073 SPDYE6P0CI01 402 aa21.29■■□□□ 1
CD9-211ENST00000546073 MCAMP43121 646 aa21.29■■□□□ 1
CD9-211ENST00000546073 MAP3K12Q12852 859 aa21.29■■□□□ 1
CD9-211ENST00000546073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.29■■□□□ 1
CD9-211ENST00000546073 SCN9AQ15858 1988 aa21.28■■□□□ 1
CD9-211ENST00000546073 PRDX5P30044 214 aa21.28■■□□□ 1
CD9-211ENST00000546073 TMED8Q6PL24 325 aaPredicted RBP21.28■■□□□ 1
CD9-211ENST00000546073 ZDHHC15Q96MV8 337 aa21.28■■□□□ 1
CD9-211ENST00000546073 GLIS2Q9BZE0 524 aaPredicted RBP21.28■■□□□ 1
CD9-211ENST00000546073 ZNF408Q9H9D4 720 aa21.28■■□□□ 1
CD9-211ENST00000546073 ECHDC1Q9NTX5 307 aa21.28■■□□□ 1
CD9-211ENST00000546073 BAG3O95817 575 aa21.27■■□□□ 1
CD9-211ENST00000546073 EGFRP00533 1210 aa21.27■■□□□ 1
CD9-211ENST00000546073 DNAJC2Q99543 621 aaKnown RBP21.27■■□□□ 1
CD9-211ENST00000546073 TMEM88BA6NKF7 163 aa21.26■□□□□ 0.99
CD9-211ENST00000546073 IDH1O75874 414 aaKnown RBP21.26■□□□□ 0.99
CD9-211ENST00000546073 ATP5JP18859 108 aa21.26■□□□□ 0.99
CD9-211ENST00000546073 ZAP70P43403 619 aa21.26■□□□□ 0.99
CD9-211ENST00000546073 LRRFIP1Q32MZ4 808 aaKnown RBP21.26■□□□□ 0.99
CD9-211ENST00000546073 NAA16Q6N069 864 aaPredicted RBP21.26■□□□□ 0.99
CD9-211ENST00000546073 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
CD9-211ENST00000546073 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.26■□□□□ 0.99
CD9-211ENST00000546073 PPP2R3BQ9Y5P8 575 aa21.26■□□□□ 0.99
CD9-211ENST00000546073 CLRN2A0PK11 232 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 ITGBL1O95965 494 aaPredicted RBP21.25■□□□□ 0.99
CD9-211ENST00000546073 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 TBC1D9Q6ZT07 1266 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 C2orf69Q8N8R5 385 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 HOOK2Q96ED9 719 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 TDRD3Q9H7E2 651 aaKnown RBP21.25■□□□□ 0.99
CD9-211ENST00000546073 ABT1Q9ULW3 272 aaKnown RBP21.25■□□□□ 0.99
CD9-211ENST00000546073 PSME4Q14997 1843 aa21.25■□□□□ 0.99
CD9-211ENST00000546073 CELF2O95319 508 aaKnown RBP21.24■□□□□ 0.99
CD9-211ENST00000546073 MECOMQ03112 1051 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 SUPT20HL1Q3ZLR7 823 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 ZSCAN25Q6NSZ9 544 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 PI16Q6UXB8 463 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 BOLA2Q9H3K6 86 aa21.24■□□□□ 0.99
CD9-211ENST00000546073 ZNF70Q9UC06 446 aaPredicted RBP21.24■□□□□ 0.99
CD9-211ENST00000546073 MAP4K4O95819 1239 aaPredicted RBP21.23■□□□□ 0.99
CD9-211ENST00000546073 PLCG2P16885 1265 aa21.23■□□□□ 0.99
CD9-211ENST00000546073 TTLL12Q14166 644 aaPredicted RBP21.23■□□□□ 0.99
CD9-211ENST00000546073 DIXDC1Q155Q3 683 aa21.23■□□□□ 0.99
CD9-211ENST00000546073 ZBED3Q96IU2 234 aaPredicted RBP21.23■□□□□ 0.99
CD9-211ENST00000546073 CREBZFQ9NS37 354 aa21.23■□□□□ 0.99
CD9-211ENST00000546073 USP40Q9NVE5 1235 aa21.23■□□□□ 0.99
CD9-211ENST00000546073 TTC41PQ6P2S7 1318 aa21.23■□□□□ 0.99
CD9-211ENST00000546073 ARAP2Q8WZ64 1704 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 ADM5C9JUS6 153 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 GOLIM4O00461 696 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 CYP2E1P05181 493 aaPredicted RBP21.22■□□□□ 0.99
CD9-211ENST00000546073 GRIK5Q16478 980 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 SPDYE2Q495Y8 402 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 DEFB129Q9H1M3 183 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 PAG1Q9NWQ8 432 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
CD9-211ENST00000546073 TRAF5O00463 557 aa21.21■□□□□ 0.99
CD9-211ENST00000546073 GLRX3O76003 335 aaKnown RBP21.21■□□□□ 0.99
CD9-211ENST00000546073 SMC5Q8IY18 1101 aa21.21■□□□□ 0.99
CD9-211ENST00000546073 FAM163AQ96GL9 167 aaPredicted RBP21.21■□□□□ 0.99
CD9-211ENST00000546073 DAGLAQ9Y4D2 1042 aa21.21■□□□□ 0.99
CD9-211ENST00000546073 MROH7-TTC4A0A0A0MT08 1334 aa21.21■□□□□ 0.99
CD9-211ENST00000546073 COL1A1P02452 1464 aaPredicted RBP21.2■□□□□ 0.98
CD9-211ENST00000546073 TCP10L2B9ZVM9 353 aa21.2■□□□□ 0.98
CD9-211ENST00000546073 MX1P20591 662 aa21.2■□□□□ 0.98
CD9-211ENST00000546073 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
CD9-211ENST00000546073 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
CD9-211ENST00000546073 NSUN4Q96CB9 384 aaKnown RBP21.2■□□□□ 0.98
CD9-211ENST00000546073 CDCA5Q96FF9 252 aa21.2■□□□□ 0.98
CD9-211ENST00000546073 HAUS7Q99871 368 aa21.2■□□□□ 0.98
CD9-211ENST00000546073 ASTN2O75129 1339 aaPredicted RBP21.2■□□□□ 0.98
CD9-211ENST00000546073 PPP1R12BO60237 982 aaPredicted RBP21.19■□□□□ 0.98
CD9-211ENST00000546073 IGHDP01880 384 aa21.19■□□□□ 0.98
CD9-211ENST00000546073 CYP7A1P22680 504 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms