RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.13■□□□□ 0.97
CPSF7-225ENST00000545934 TDRD3Q9H7E2 651 aaKnown RBP21.13■□□□□ 0.97
CPSF7-225ENST00000545934 SP3Q02447 781 aa21.12■□□□□ 0.97
CPSF7-225ENST00000545934 DZIP1LQ8IYY4 767 aaKnown RBP21.12■□□□□ 0.97
CPSF7-225ENST00000545934 ELP3Q9H9T3 547 aa21.12■□□□□ 0.97
CPSF7-225ENST00000545934 PUS3Q9BZE2 481 aaKnown RBP21.11■□□□□ 0.97
CPSF7-225ENST00000545934 EFCC1Q9HA90 598 aa21.11■□□□□ 0.97
CPSF7-225ENST00000545934 C9orf78Q9NZ63 289 aaPredicted RBP21.11■□□□□ 0.97
CPSF7-225ENST00000545934 RIPOR2Q9Y4F9 1068 aa21.11■□□□□ 0.97
CPSF7-225ENST00000545934 UTYO14607 1347 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 CRKP46108 304 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 GRIK5Q16478 980 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.1■□□□□ 0.97
CPSF7-225ENST00000545934 BRI3BPQ8WY22 251 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 SUCLG2Q96I99 432 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 MRS2Q9HD23 443 aa21.1■□□□□ 0.97
CPSF7-225ENST00000545934 SALL2Q9Y467 1007 aaPredicted RBP21.1■□□□□ 0.97
CPSF7-225ENST00000545934 VGLL4Q14135 290 aa21.09■□□□□ 0.97
CPSF7-225ENST00000545934 FBXO33Q7Z6M2 555 aa21.09■□□□□ 0.97
CPSF7-225ENST00000545934 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
CPSF7-225ENST00000545934 SRCIN1Q9C0H9 1055 aa21.09■□□□□ 0.97
CPSF7-225ENST00000545934 TMEM39BQ9GZU3 492 aa21.09■□□□□ 0.97
CPSF7-225ENST00000545934 MROH5Q6ZUA9 1318 aa21.08■□□□□ 0.97
CPSF7-225ENST00000545934 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.97
CPSF7-225ENST00000545934 HDLBPQ00341 1268 aaKnown RBP21.08■□□□□ 0.97
CPSF7-225ENST00000545934 RABL6Q3YEC7 729 aaPredicted RBP21.08■□□□□ 0.97
CPSF7-225ENST00000545934 TCP10L2B9ZVM9 353 aa21.07■□□□□ 0.96
CPSF7-225ENST00000545934 TNNI2P48788 182 aa21.07■□□□□ 0.96
CPSF7-225ENST00000545934 MAP3K9P80192 1104 aa21.07■□□□□ 0.96
CPSF7-225ENST00000545934 CCL15-CCL14A0A0B4J2E2 113 aa21.06■□□□□ 0.96
CPSF7-225ENST00000545934 GTF2A2P52657 109 aa21.06■□□□□ 0.96
CPSF7-225ENST00000545934 CCL15Q16663 113 aa21.06■□□□□ 0.96
CPSF7-225ENST00000545934 SLC4A10Q6U841 1118 aa21.06■□□□□ 0.96
CPSF7-225ENST00000545934 VGLL2Q8N8G2 317 aa21.06■□□□□ 0.96
CPSF7-225ENST00000545934 SPDYE5A6NIY4 337 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 EN2P19622 333 aaPredicted RBP21.05■□□□□ 0.96
CPSF7-225ENST00000545934 FAM43AQ8N2R8 423 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 TBC1D22AQ8WUA7 517 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 ZNF333Q96JL9 665 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 MRIQ9BWK5 157 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 AK9Q5TCS8 1911 aa21.05■□□□□ 0.96
CPSF7-225ENST00000545934 TAF1CQ15572 869 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-225ENST00000545934 HABP4Q5JVS0 413 aaKnown RBP21.04■□□□□ 0.96
CPSF7-225ENST00000545934 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
CPSF7-225ENST00000545934 ZFYVE28Q9HCC9 887 aa21.04■□□□□ 0.96
CPSF7-225ENST00000545934 CSADQ9Y600 493 aa21.04■□□□□ 0.96
CPSF7-225ENST00000545934 SNCAIPQ9Y6H5 919 aa21.04■□□□□ 0.96
CPSF7-225ENST00000545934 MGAMO43451 1857 aa21.04■□□□□ 0.96
CPSF7-225ENST00000545934 LRRC24Q50LG9 513 aa21.03■□□□□ 0.96
CPSF7-225ENST00000545934 OTUD5Q96G74 571 aa21.03■□□□□ 0.96
CPSF7-225ENST00000545934 ZDHHC15Q96MV8 337 aa21.03■□□□□ 0.96
CPSF7-225ENST00000545934 BICC1Q9H694 974 aaKnown RBP21.03■□□□□ 0.96
CPSF7-225ENST00000545934 IQSEC3Q9UPP2 1182 aaPredicted RBP21.03■□□□□ 0.96
CPSF7-225ENST00000545934 RPAP1Q9BWH6 1393 aaPredicted RBP21.02■□□□□ 0.96
CPSF7-225ENST00000545934 PDE8BO95263 885 aa21.02■□□□□ 0.96
CPSF7-225ENST00000545934 FKBP1CQ5VVH2 108 aa21.02■□□□□ 0.96
CPSF7-225ENST00000545934 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
CPSF7-225ENST00000545934 TEKT1Q969V4 418 aa21.02■□□□□ 0.96
CPSF7-225ENST00000545934 ZCCHC17Q9NP64 241 aaKnown RBP21.02■□□□□ 0.96
CPSF7-225ENST00000545934 PTCH2Q9Y6C5 1203 aa21.02■□□□□ 0.96
CPSF7-225ENST00000545934 KIF16BQ96L93 1317 aa21.02■□□□□ 0.95
CPSF7-225ENST00000545934 CACNB3P54284 484 aa21.01■□□□□ 0.95
CPSF7-225ENST00000545934 CHAF1AQ13111 956 aaPredicted RBP21.01■□□□□ 0.95
CPSF7-225ENST00000545934 ARHGEF6Q15052 776 aa21.01■□□□□ 0.95
CPSF7-225ENST00000545934 DOCK2Q92608 1830 aa21.01■□□□□ 0.95
CPSF7-225ENST00000545934 CAVIN4Q5BKX8 364 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 METTL24Q5JXM2 366 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
CPSF7-225ENST00000545934 VPS37DQ86XT2 251 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 ERO1BQ86YB8 467 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 SUGT1Q9Y2Z0 365 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 ZNF521Q96K83 1311 aa21■□□□□ 0.95
CPSF7-225ENST00000545934 TLR2O60603 784 aa20.99■□□□□ 0.95
CPSF7-225ENST00000545934 CETPP11597 493 aa20.99■□□□□ 0.95
CPSF7-225ENST00000545934 FGFR2P21802 821 aa20.99■□□□□ 0.95
CPSF7-225ENST00000545934 PTPRFP10586 1907 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 BTBD19C9JJ37 291 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 BCAMP50895 628 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 PPIL2Q13356 520 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 SLC9C1Q4G0N8 1177 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 HHIPL2Q6UWX4 724 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 NBPF11Q86T75 865 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 MRPL50Q8N5N7 158 aaKnown RBP20.98■□□□□ 0.95
CPSF7-225ENST00000545934 ZKSCAN4Q969J2 545 aaPredicted RBP20.98■□□□□ 0.95
CPSF7-225ENST00000545934 WRNIP1Q96S55 665 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 TMEM106CQ9BVX2 250 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 MAST3O60307 1309 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 MYH2Q9UKX2 1941 aa20.98■□□□□ 0.95
CPSF7-225ENST00000545934 IRF6O14896 467 aa20.97■□□□□ 0.95
CPSF7-225ENST00000545934 LACTBP83111 547 aaPredicted RBP20.97■□□□□ 0.95
CPSF7-225ENST00000545934 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
CPSF7-225ENST00000545934 HOOK2Q96ED9 719 aa20.97■□□□□ 0.95
CPSF7-225ENST00000545934 ARHGAP39Q9C0H5 1083 aa20.97■□□□□ 0.95
CPSF7-225ENST00000545934 PHIPQ8WWQ0 1821 aa20.97■□□□□ 0.95
CPSF7-225ENST00000545934 FRAT2O75474 233 aaPredicted RBP20.96■□□□□ 0.95
CPSF7-225ENST00000545934 SNAPC2Q13487 334 aa20.96■□□□□ 0.95
CPSF7-225ENST00000545934 TMOD2Q9NZR1 351 aa20.96■□□□□ 0.95
CPSF7-225ENST00000545934 ANP32CO43423 234 aa20.95■□□□□ 0.94
CPSF7-225ENST00000545934 GNRH1P01148 92 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms