RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 EYA3Q99504 573 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 VPS33BQ9H267 617 aa11.87□□□□□ -0.51
DDB1-225ENST00000545930 TTC41PQ6P2S7 1318 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 SPEF2Q9C093 1822 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 TAF5LO75529 589 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 FGFR2P21802 821 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 BCAMP50895 628 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 TIMM10P62072 90 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 CCDC93Q567U6 631 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 EAF2Q96CJ1 260 aaPredicted RBP11.86□□□□□ -0.51
DDB1-225ENST00000545930 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
DDB1-225ENST00000545930 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
DDB1-225ENST00000545930 DLEC1Q9Y238 1755 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
DDB1-225ENST00000545930 MAP3K7O43318 606 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 GPSM2P81274 684 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 E2F4Q16254 413 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 C15orf52Q6ZUT6 534 aaKnown RBP11.85□□□□□ -0.51
DDB1-225ENST00000545930 PACS2Q86VP3 889 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 VPS37DQ86XT2 251 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 CCDC8Q9H0W5 538 aaPredicted RBP11.85□□□□□ -0.51
DDB1-225ENST00000545930 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 OSBPL3Q9H4L5 887 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
DDB1-225ENST00000545930 LRP5O75197 1615 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 AOX1Q06278 1338 aa11.85□□□□□ -0.51
DDB1-225ENST00000545930 SLX4Q8IY92 1834 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 C6orf229H3BNL8 230 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 C21orf2O43822 256 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
DDB1-225ENST00000545930 UFL1O94874 794 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 MX1P20591 662 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 PLEKHM2Q8IWE5 1019 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDB1-225ENST00000545930 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 ZNF512BQ96KM6 892 aaPredicted RBP11.84□□□□□ -0.51
DDB1-225ENST00000545930 PSMD1Q99460 953 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
DDB1-225ENST00000545930 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
DDB1-225ENST00000545930 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 HIBADHP31937 336 aaKnown RBP11.83□□□□□ -0.52
DDB1-225ENST00000545930 PDE1AP54750 535 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
DDB1-225ENST00000545930 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
DDB1-225ENST00000545930 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 SEPT9Q9UHD8 586 aaPredicted RBP11.83□□□□□ -0.52
DDB1-225ENST00000545930 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 ZNF609O15014 1411 aa11.83□□□□□ -0.52
DDB1-225ENST00000545930 SEMA3EO15041 775 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
DDB1-225ENST00000545930 ATP5JP18859 108 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 RGS3P49796 1198 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 DBNDD2Q9BQY9 259 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.82□□□□□ -0.52
DDB1-225ENST00000545930 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
DDB1-225ENST00000545930 DBNLQ9UJU6 430 aaKnown RBP11.82□□□□□ -0.52
DDB1-225ENST00000545930 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
DDB1-225ENST00000545930 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 IGSF3O75054 1194 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 FKBP4Q02790 459 aaKnown RBP eCLIP11.81□□□□□ -0.52
DDB1-225ENST00000545930 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 FBXO33Q7Z6M2 555 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
DDB1-225ENST00000545930 COA1Q9GZY4 146 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 DENND2AQ9ULE3 1009 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 SALL3Q9BXA9 1300 aa11.81□□□□□ -0.52
DDB1-225ENST00000545930 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
DDB1-225ENST00000545930 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
DDB1-225ENST00000545930 ARID4AP29374 1257 aaPredicted RBP11.8□□□□□ -0.52
DDB1-225ENST00000545930 LRRFIP1Q32MZ4 808 aaKnown RBP11.8□□□□□ -0.52
DDB1-225ENST00000545930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.8□□□□□ -0.52
DDB1-225ENST00000545930 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 SNAP23O00161 211 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
DDB1-225ENST00000545930 ADORA1P30542 326 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 TTF1Q15361 905 aaPredicted RBP11.79□□□□□ -0.52
DDB1-225ENST00000545930 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 PODNQ7Z5L7 613 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 TAOK3Q9H2K8 898 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 WBP1LQ9NX94 342 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
DDB1-225ENST00000545930 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 A0A1B0GUL6 1792 aa11.79□□□□□ -0.52
DDB1-225ENST00000545930 COL4A1P02462 1669 aa11.78□□□□□ -0.52
DDB1-225ENST00000545930 GRIN3BO60391 1043 aa11.78□□□□□ -0.52
DDB1-225ENST00000545930 PHKA1P46020 1223 aa11.78□□□□□ -0.52
DDB1-225ENST00000545930 GYG1P46976 350 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms