RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 ATRIPQ8WXE1 791 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 DCTPP1Q9H773 170 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 ZKSCAN5Q9Y2L8 839 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 TSPOAP1O95153 1857 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 PCDH11XQ9BZA7 1347 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 PCDH11YQ9BZA8 1340 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 CERS3Q8IU89 383 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
CIT-217ENST00000545913 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
CIT-217ENST00000545913 PPP1R7Q15435 360 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
CIT-217ENST00000545913 MAPKBP1O60336 1514 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 NDC80O14777 642 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 TNNI2P48788 182 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 TNNC1P63316 161 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 EPB41P11171 864 aaKnown RBP13.17□□□□□ -0.3
CIT-217ENST00000545913 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
CIT-217ENST00000545913 SH2D4AQ9H788 454 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 EYA3Q99504 573 aa13.17□□□□□ -0.3
CIT-217ENST00000545913 IRS4O14654 1257 aaPredicted RBP13.16□□□□□ -0.3
CIT-217ENST00000545913 CLCN1P35523 988 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
CIT-217ENST00000545913 CSRNP2Q9H175 543 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
CIT-217ENST00000545913 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 ATP5DP30049 168 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 ALDH3A1P30838 453 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 SNX16P57768 344 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 TRIM14Q14142 442 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
CIT-217ENST00000545913 ARFGAP2Q8N6H7 521 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 TOM1O60784 492 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 ANAPC4Q9UJX5 808 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
CIT-217ENST00000545913 VWA3BQ502W6 1294 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 CAPZA3Q96KX2 299 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
CIT-217ENST00000545913 GJC1P36383 396 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 PLCD1P51178 756 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 EBAG9O00559 213 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CAPN2P17655 700 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 DAAM2Q86T65 1068 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
CIT-217ENST00000545913 SMTNP53814 917 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
CIT-217ENST00000545913 JDP2Q8WYK2 163 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
CIT-217ENST00000545913 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 PSMC4P43686 418 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 GPR161Q8N6U8 529 aaKnown RBP13.15□□□□□ -0.3
CIT-217ENST00000545913 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 AKR1B15C9JRZ8 316 aaPredicted RBP13.15□□□□□ -0.3
CIT-217ENST00000545913 TFCP2Q12800 502 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
CIT-217ENST00000545913 CALCOCO2Q13137 446 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 CPLX4Q7Z7G2 160 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 IPO4Q8TEX9 1081 aaKnown RBP13.14□□□□□ -0.31
CIT-217ENST00000545913 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 ATP2C2O75185 946 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 ZNF569Q5MCW4 686 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 FBLN1P23142 703 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 GPATCH11Q8N954 259 aa13.14□□□□□ -0.31
CIT-217ENST00000545913 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms