RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
LTBR-214ENST00000545445 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
LTBR-214ENST00000545445 VGLL2Q8N8G2 317 aa14.57□□□□□ -0.08
LTBR-214ENST00000545445 CCDC136Q96JN2 1154 aa14.57□□□□□ -0.08
LTBR-214ENST00000545445 GMLQ99445 158 aa14.57□□□□□ -0.08
LTBR-214ENST00000545445 SASH1O94885 1247 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 IGHDP01880 384 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 SMC5Q8IY18 1101 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 RHPN1Q8TCX5 695 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 LPIN2Q92539 896 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 ZBTB47Q9UFB7 747 aaPredicted RBP14.56□□□□□ -0.08
LTBR-214ENST00000545445 ZNF804BA4D1E1 1349 aa14.56□□□□□ -0.08
LTBR-214ENST00000545445 TAF5LO75529 589 aa14.55□□□□□ -0.08
LTBR-214ENST00000545445 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
LTBR-214ENST00000545445 SREBF2Q12772 1141 aa14.55□□□□□ -0.08
LTBR-214ENST00000545445 TFCP2Q12800 502 aa14.55□□□□□ -0.08
LTBR-214ENST00000545445 NBPF9Q3BBW0 867 aa14.55□□□□□ -0.08
LTBR-214ENST00000545445 C15orf52Q6ZUT6 534 aaKnown RBP14.55□□□□□ -0.08
LTBR-214ENST00000545445 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
LTBR-214ENST00000545445 HELBQ8NG08 1087 aaPredicted RBP14.55□□□□□ -0.08
LTBR-214ENST00000545445 SLC5A1P13866 664 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 FGFR2P21802 821 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 PRKG1Q13976 671 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 ATP2B3Q16720 1220 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 CENPQQ7L2Z9 268 aaPredicted RBP14.54□□□□□ -0.08
LTBR-214ENST00000545445 TRIM17Q9Y577 477 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
LTBR-214ENST00000545445 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 USP17L3A6NCW0 530 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 USP17L4A6NCW7 530 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 FXR1P51114 621 aaKnown RBP eCLIP14.53□□□□□ -0.08
LTBR-214ENST00000545445 USP17L1Q7RTZ2 530 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 MXD3Q9BW11 206 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 CFHR5Q9BXR6 569 aa14.53□□□□□ -0.08
LTBR-214ENST00000545445 APBB1O00213 710 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 NF2P35240 595 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 TNNI3KQ59H18 835 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 ANKRD45Q5TZF3 282 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 OTOP1Q7RTM1 612 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 FPGT-TNNI3KV9GXZ4 949 aa14.52□□□□□ -0.09
LTBR-214ENST00000545445 A0A1B0GUL7 405 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 WTIPA6NIX2 430 aaPredicted RBP14.51□□□□□ -0.09
LTBR-214ENST00000545445 CAVIN4Q5BKX8 364 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 SPRYD7Q5W111 196 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 FBXW7Q969H0 707 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.51□□□□□ -0.09
LTBR-214ENST00000545445 FZD1Q9UP38 647 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 CENPFP49454 3210 aa14.51□□□□□ -0.09
LTBR-214ENST00000545445 PSME4Q14997 1843 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 BRCA2P51587 3418 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 WNT10BO00744 389 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 IFIT2P09913 472 aaKnown RBP14.5□□□□□ -0.09
LTBR-214ENST00000545445 TIMM10P62072 90 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 NUCB1Q02818 461 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 DACT2Q5SW24 774 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 ARMC9Q7Z3E5 817 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 ZNF804AQ7Z570 1209 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 AACSQ86V21 672 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 EAF2Q96CJ1 260 aaPredicted RBP14.5□□□□□ -0.09
LTBR-214ENST00000545445 NEUROD6Q96NK8 337 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 IL1RAPL2Q9NP60 686 aa14.5□□□□□ -0.09
LTBR-214ENST00000545445 IRS2Q9Y4H2 1338 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 SNAP23O00161 211 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 ZBTB22O15209 634 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 HIBADHP31937 336 aaKnown RBP14.49□□□□□ -0.09
LTBR-214ENST00000545445 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 PODNQ7Z5L7 613 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 FBXO33Q7Z6M2 555 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 CHD1LQ86WJ1 897 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 VPS37DQ86XT2 251 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 XAGE2Q96GT9 111 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 COA1Q9GZY4 146 aa14.49□□□□□ -0.09
LTBR-214ENST00000545445 GNL3LQ9NVN8 582 aaKnown RBP14.49□□□□□ -0.09
LTBR-214ENST00000545445 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
LTBR-214ENST00000545445 A0A1B0GUL6 1792 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 ALDH1A1P00352 501 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 EN2P19622 333 aaPredicted RBP14.48□□□□□ -0.09
LTBR-214ENST00000545445 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 LDLRAD1Q5T700 205 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 IFNL1Q8IU54 200 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
LTBR-214ENST00000545445 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
LTBR-214ENST00000545445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.48□□□□□ -0.09
LTBR-214ENST00000545445 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
LTBR-214ENST00000545445 IGF2BP3O00425 579 aaKnown RBP eCLIP14.47□□□□□ -0.09
LTBR-214ENST00000545445 SMARCA5O60264 1052 aaPredicted RBP14.47□□□□□ -0.09
LTBR-214ENST00000545445 CD99L2Q8TCZ2 262 aa14.47□□□□□ -0.09
LTBR-214ENST00000545445 GPATCH3Q96I76 525 aa14.47□□□□□ -0.09
LTBR-214ENST00000545445 ZNF512BQ96KM6 892 aaPredicted RBP14.47□□□□□ -0.09
LTBR-214ENST00000545445 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
LTBR-214ENST00000545445 PTPN22Q9Y2R2 807 aa14.47□□□□□ -0.09
LTBR-214ENST00000545445 SEMA3EO15041 775 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 UQCRFS1P1P0C7P4 283 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 IL1R1P14778 569 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 GYG1P46976 350 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 CCDC102BQ68D86 513 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 TXNRD3Q86VQ6 643 aa14.46□□□□□ -0.09
LTBR-214ENST00000545445 APOBEC3FQ8IUX4 373 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms