RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 EPHX2P34913 555 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 MAP3K12Q12852 859 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 KIAA0825Q8IV33 1275 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 PLEKHM2Q8IWE5 1019 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 PI4K2BQ8TCG2 481 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 FAM163AQ96GL9 167 aaPredicted RBP14.28□□□□□ -0.12
SNHG1-221ENST00000544983 SNRKQ9NRH2 765 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
SNHG1-221ENST00000544983 LDHCP07864 332 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 EPS15P42566 896 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 HHIPL2Q6UWX4 724 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 PI16Q6UXB8 463 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 DZIP1Q86YF9 867 aaKnown RBP14.27□□□□□ -0.13
SNHG1-221ENST00000544983 CERS3Q8IU89 383 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 OTUD7AQ8TE49 926 aaPredicted RBP14.27□□□□□ -0.13
SNHG1-221ENST00000544983 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.13
SNHG1-221ENST00000544983 TEKT1Q969V4 418 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 MXD3Q9BW11 206 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNHG1-221ENST00000544983 TAF1DQ9H5J8 278 aaPredicted RBP14.27□□□□□ -0.13
SNHG1-221ENST00000544983 RRAGCQ9HB90 399 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 MYOZ2Q9NPC6 264 aa14.27□□□□□ -0.13
SNHG1-221ENST00000544983 POTECB2RU33 542 aa14.26□□□□□ -0.13
SNHG1-221ENST00000544983 PRDX5P30044 214 aa14.26□□□□□ -0.13
SNHG1-221ENST00000544983 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
SNHG1-221ENST00000544983 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
SNHG1-221ENST00000544983 RAI14Q9P0K7 980 aa14.26□□□□□ -0.13
SNHG1-221ENST00000544983 GOLIM4O00461 696 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 MYO1BO43795 1136 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 CAPN15O75808 1086 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
SNHG1-221ENST00000544983 DLGAP5Q15398 846 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 KIF4BQ2VIQ3 1234 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
SNHG1-221ENST00000544983 ZDHHC15Q96MV8 337 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
SNHG1-221ENST00000544983 F8W031 263 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-221ENST00000544983 IDH1O75874 414 aaKnown RBP14.24□□□□□ -0.13
SNHG1-221ENST00000544983 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-221ENST00000544983 PDE4AP27815 886 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 CRKP46108 304 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 MECOMQ03112 1051 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 TBC1D9Q6ZT07 1266 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 KBTBD3Q8NAB2 608 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 ZNF526Q8TF50 670 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-221ENST00000544983 EVI5LQ96CN4 794 aa14.24□□□□□ -0.13
SNHG1-221ENST00000544983 PIH1D3Q9NQM4 214 aaKnown RBP14.24□□□□□ -0.13
SNHG1-221ENST00000544983 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 PLCG2P16885 1265 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 RBM5P52756 815 aaKnown RBP eCLIP14.23□□□□□ -0.13
SNHG1-221ENST00000544983 GRIK5Q16478 980 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 CFAP100Q494V2 611 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 TSHZ3Q63HK5 1081 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 NAA16Q6N069 864 aaPredicted RBP14.23□□□□□ -0.13
SNHG1-221ENST00000544983 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 ZBED3Q96IU2 234 aaPredicted RBP14.23□□□□□ -0.13
SNHG1-221ENST00000544983 NOL10Q9BSC4 688 aaKnown RBP14.23□□□□□ -0.13
SNHG1-221ENST00000544983 ANTXR1Q9H6X2 564 aa14.23□□□□□ -0.13
SNHG1-221ENST00000544983 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 GAKO14976 1311 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 WNT10BO00744 389 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 BAG3O95817 575 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 TBC1D10BQ4KMP7 808 aaPredicted RBP14.22□□□□□ -0.13
SNHG1-221ENST00000544983 SLC9C2Q5TAH2 1124 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 COL13A1Q5TAT6 717 aaPredicted RBP14.22□□□□□ -0.13
SNHG1-221ENST00000544983 FKBP1CQ5VVH2 108 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 SAMD7Q7Z3H4 446 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 PGAP2Q9UHJ9 254 aa14.22□□□□□ -0.13
SNHG1-221ENST00000544983 DOCK2Q92608 1830 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 UBE3CQ15386 1083 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 EAPPQ56P03 285 aaPredicted RBP14.21□□□□□ -0.13
SNHG1-221ENST00000544983 TTC22Q5TAA0 569 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 APOBEC3HQ6NTF7 200 aaKnown RBP14.21□□□□□ -0.13
SNHG1-221ENST00000544983 TRPM4Q8TD43 1214 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 DAGLAQ9Y4D2 1042 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 NDUFB9Q9Y6M9 179 aa14.21□□□□□ -0.13
SNHG1-221ENST00000544983 RFX7Q2KHR2 1363 aa14.21□□□□□ -0.14
SNHG1-221ENST00000544983 MAST2Q6P0Q8 1798 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 MYH2Q9UKX2 1941 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 SHTN1A0MZ66 631 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 TRIM6-TRIM34B2RNG4 842 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 HIP1O00291 1037 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 KIF3CO14782 793 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 TOMM70O94826 608 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 PDE6AP16499 860 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 CYP7A1P22680 504 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 ADD2P35612 726 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 HIRAP54198 1017 aaPredicted RBP14.2□□□□□ -0.14
SNHG1-221ENST00000544983 PPP4CP60510 307 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 TNFAIP1Q13829 316 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 DIXDC1Q155Q3 683 aa14.2□□□□□ -0.14
SNHG1-221ENST00000544983 RBM26Q5T8P6 1007 aaKnown RBP14.2□□□□□ -0.14
SNHG1-221ENST00000544983 APOBEC3FQ8IUX4 373 aaKnown RBP14.2□□□□□ -0.14
SNHG1-221ENST00000544983 DNAJC5GQ8N7S2 189 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms