RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 DDX11Q96FC9 970 aa21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 MPHOSPH8Q99549 860 aa21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 CLSTN2Q9H4D0 955 aa21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 PIH1D3Q9NQM4 214 aaKnown RBP21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 CARMIL3Q8ND23 1372 aa21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 A0A0G2JLW4 131 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 NTSR2O95665 410 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 PDE6AP16499 860 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 PHKA1P46020 1223 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 FAM173BQ6P4H8 233 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 GIMAP6Q6P9H5 292 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 PI16Q6UXB8 463 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 KDM4AO75164 1064 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 HCLS1P14317 486 aaPredicted RBP21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 MAP3K12Q12852 859 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 SPATA5Q8NB90 893 aa21.15■□□□□ 0.98
TNFAIP1-202ENST00000544907 TAF1LQ8IZX4 1826 aa21.14■□□□□ 0.98
TNFAIP1-202ENST00000544907 ZNF532Q9HCE3 1301 aa21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 LIG1P18858 919 aa21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 IGHMBP2P38935 993 aaKnown RBP21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 TMEM87BQ96K49 555 aa21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 TFIP11Q9UBB9 837 aaKnown RBP21.14■□□□□ 0.97
TNFAIP1-202ENST00000544907 CTAGE5O15320 804 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 GNAT2P19087 354 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 ANTXR2P58335 489 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 ITPK1Q13572 414 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 FAM200AQ8TCP9 573 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 STRBPQ96SI9 672 aaKnown RBP21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 MTA3Q9BTC8 594 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 TNMDQ9H2S6 317 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 DACT1Q9NYF0 836 aa21.13■□□□□ 0.97
TNFAIP1-202ENST00000544907 DTNBO60941 627 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 KCNQ4P56696 695 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 CCT2P78371 535 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 PROM2Q8N271 834 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 ANGEL1Q9UNK9 670 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 HPS5Q9UPZ3 1129 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 DOCK2Q92608 1830 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 BCORQ6W2J9 1755 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 PATL2C9JE40 543 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 TERF1P54274 439 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 BRAPQ7Z569 592 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 LRRC4BQ9NT99 713 aa21.12■□□□□ 0.97
TNFAIP1-202ENST00000544907 PNPLA7Q6ZV29 1317 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 KLF18A0A0U1RQI7 1052 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 OFD1O75665 1012 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 CDKL5O76039 1030 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 HAND2P61296 217 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 AIDAQ96BJ3 306 aa21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 NCOA5Q9HCD5 579 aaKnown RBP21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 NIP7Q9Y221 180 aaKnown RBP eCLIP21.11■□□□□ 0.97
TNFAIP1-202ENST00000544907 GOLGA8BA8MQT2 603 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 TPM3P06753 285 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 HMGB2P26583 209 aaKnown RBP21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 TYRO3Q06418 890 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 BICD2Q8TD16 824 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 NBPF3Q9H094 633 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 USP25Q9UHP3 1055 aa21.1■□□□□ 0.97
TNFAIP1-202ENST00000544907 MYH15Q9Y2K3 1946 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 RASGRF1Q13972 1273 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 SF3B3Q15393 1217 aaKnown RBP21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 SGMS1Q86VZ5 419 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 FBXO18Q8NFZ0 1043 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 CNNM2Q9H8M5 875 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 RTEL1Q9NZ71 1219 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 C4BP0C0L5 1744 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 SH2B2O14492 632 aaPredicted RBP21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 ZBTB22O15209 634 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 ADCY5O95622 1261 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 CHST3Q7LGC8 479 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
TNFAIP1-202ENST00000544907 NID2Q14112 1375 aa21.08■□□□□ 0.97
TNFAIP1-202ENST00000544907 CPLX1O14810 134 aa21.08■□□□□ 0.96
TNFAIP1-202ENST00000544907 LIFRP42702 1097 aa21.08■□□□□ 0.96
TNFAIP1-202ENST00000544907 CPLX2Q6PUV4 134 aaKnown RBP21.08■□□□□ 0.96
TNFAIP1-202ENST00000544907 C8orf76Q96K31 380 aa21.08■□□□□ 0.96
TNFAIP1-202ENST00000544907 MRVI1Q9Y6F6 885 aa21.08■□□□□ 0.96
TNFAIP1-202ENST00000544907 ZNF804BA4D1E1 1349 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 A0A1W2PQ27 194 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 A0A1W2PQ64 194 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 NR1I2O75469 434 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 YEATS4O95619 227 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 PTMAP06454 111 aaKnown RBP21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 TBC1D10CQ8IV04 446 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 LINC00116Q8NCU8 138 aa21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 NAP1L2Q9ULW6 460 aaPredicted RBP21.07■□□□□ 0.96
TNFAIP1-202ENST00000544907 RCAN1P53805 252 aa21.06■□□□□ 0.96
TNFAIP1-202ENST00000544907 SLC10A5Q5PT55 438 aa21.06■□□□□ 0.96
TNFAIP1-202ENST00000544907 TMED8Q6PL24 325 aaPredicted RBP21.06■□□□□ 0.96
TNFAIP1-202ENST00000544907 USP28Q96RU2 1077 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms