RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 PRELPP51888 382 aa15.05■□□□□ -0
LMO3-231ENST00000544754 UBE3CQ15386 1083 aa15.05■□□□□ -0
LMO3-231ENST00000544754 MFSD14BQ5SR56 506 aa15.05■□□□□ -0
LMO3-231ENST00000544754 TTLL5Q6EMB2 1281 aa15.05■□□□□ -0
LMO3-231ENST00000544754 NIM1KQ8IY84 436 aa15.05■□□□□ -0
LMO3-231ENST00000544754 ZNF384Q8TF68 577 aa15.05■□□□□ -0
LMO3-231ENST00000544754 OSBP2Q969R2 916 aa15.05■□□□□ -0
LMO3-231ENST00000544754 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
LMO3-231ENST00000544754 MAST3O60307 1309 aa15.05■□□□□ -0
LMO3-231ENST00000544754 M0R2C6 588 aa15.04■□□□□ -0
LMO3-231ENST00000544754 MECOMQ03112 1051 aa15.04■□□□□ -0
LMO3-231ENST00000544754 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
LMO3-231ENST00000544754 STRIP1Q5VSL9 837 aa15.04■□□□□ -0
LMO3-231ENST00000544754 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
LMO3-231ENST00000544754 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
LMO3-231ENST00000544754 ZNF589Q86UQ0 364 aaPredicted RBP15.04■□□□□ -0
LMO3-231ENST00000544754 CERS5Q8N5B7 392 aa15.04■□□□□ -0
LMO3-231ENST00000544754 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
LMO3-231ENST00000544754 MXD3Q9BW11 206 aa15.04■□□□□ -0
LMO3-231ENST00000544754 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
LMO3-231ENST00000544754 USP17L3A6NCW0 530 aa15.03■□□□□ -0
LMO3-231ENST00000544754 USP17L4A6NCW7 530 aa15.03■□□□□ -0
LMO3-231ENST00000544754 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
LMO3-231ENST00000544754 IGSF3O75054 1194 aa15.03■□□□□ -0
LMO3-231ENST00000544754 REC8O95072 547 aa15.03■□□□□ -0
LMO3-231ENST00000544754 CYP7A1P22680 504 aa15.03■□□□□ -0
LMO3-231ENST00000544754 DACT2Q5SW24 774 aa15.03■□□□□ -0
LMO3-231ENST00000544754 NAA16Q6N069 864 aaPredicted RBP15.03■□□□□ -0
LMO3-231ENST00000544754 USP17L1Q7RTZ2 530 aa15.03■□□□□ -0
LMO3-231ENST00000544754 PUS7LQ9H0K6 701 aaKnown RBP15.03■□□□□ -0
LMO3-231ENST00000544754 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
LMO3-231ENST00000544754 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
LMO3-231ENST00000544754 CCDC171Q6TFL3 1326 aa15.02■□□□□ -0
LMO3-231ENST00000544754 FKBP1AP62942 108 aaKnown RBP15.02■□□□□ -0
LMO3-231ENST00000544754 ADGRA1Q86SQ6 560 aa15.02■□□□□ -0
LMO3-231ENST00000544754 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
LMO3-231ENST00000544754 JDP2Q8WYK2 163 aa15.02■□□□□ -0
LMO3-231ENST00000544754 ANO2Q9NQ90 1003 aa15.02■□□□□ -0
LMO3-231ENST00000544754 SUGT1Q9Y2Z0 365 aa15.02■□□□□ -0
LMO3-231ENST00000544754 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
LMO3-231ENST00000544754 RAD17O75943 681 aa15.01□□□□□ -0.01
LMO3-231ENST00000544754 TMED8Q6PL24 325 aaPredicted RBP15.01□□□□□ -0.01
LMO3-231ENST00000544754 LSG1Q9H089 658 aaKnown RBP15.01□□□□□ -0.01
LMO3-231ENST00000544754 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
LMO3-231ENST00000544754 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
LMO3-231ENST00000544754 PSMD14O00487 310 aa15□□□□□ -0.01
LMO3-231ENST00000544754 GPAA1O43292 621 aa15□□□□□ -0.01
LMO3-231ENST00000544754 PTH1RQ03431 593 aa15□□□□□ -0.01
LMO3-231ENST00000544754 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
LMO3-231ENST00000544754 KIAA1211Q6ZU35 1233 aa15□□□□□ -0.01
LMO3-231ENST00000544754 USP26Q9BXU7 913 aa15□□□□□ -0.01
LMO3-231ENST00000544754 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
LMO3-231ENST00000544754 MBD4O95243 580 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
LMO3-231ENST00000544754 VIL1P09327 827 aaKnown RBP14.99□□□□□ -0.01
LMO3-231ENST00000544754 LMNB1P20700 586 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 GSTO1P78417 241 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 CXCL9Q07325 125 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 MIGA1Q8NAN2 632 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 AIDAQ96BJ3 306 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 TTF2Q9UNY4 1162 aaKnown RBP14.99□□□□□ -0.01
LMO3-231ENST00000544754 ECM29Q5VYK3 1845 aa14.99□□□□□ -0.01
LMO3-231ENST00000544754 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 MYO3BQ8WXR4 1341 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 FZD9O00144 591 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 EPB41L2O43491 1005 aaKnown RBP14.98□□□□□ -0.01
LMO3-231ENST00000544754 LDHCP07864 332 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 DYNLL1P63167 89 aaKnown RBP14.98□□□□□ -0.01
LMO3-231ENST00000544754 GPR162Q16538 588 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 VPS53Q5VIR6 699 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 CIAPIN1Q6FI81 312 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
LMO3-231ENST00000544754 KIAA0825Q8IV33 1275 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 STRBPQ96SI9 672 aaKnown RBP14.98□□□□□ -0.01
LMO3-231ENST00000544754 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
LMO3-231ENST00000544754 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 FOCADQ5VW36 1801 aa14.98□□□□□ -0.01
LMO3-231ENST00000544754 GAKO14976 1311 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 LAMA4Q16363 1823 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 FOXP2O15409 715 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 SCNN1DP51172 638 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 SLF2Q8IX21 1173 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 MAP4K1Q92918 833 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 FAM163AQ96GL9 167 aaPredicted RBP14.97□□□□□ -0.01
LMO3-231ENST00000544754 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 GMLQ99445 158 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
LMO3-231ENST00000544754 BAZ2AQ9UIF9 1905 aaKnown RBP14.97□□□□□ -0.01
LMO3-231ENST00000544754 HSPD1P10809 573 aaKnown RBP14.96□□□□□ -0.01
LMO3-231ENST00000544754 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.01
LMO3-231ENST00000544754 TNIP1Q15025 636 aa14.96□□□□□ -0.01
LMO3-231ENST00000544754 DSCC1Q9BVC3 393 aa14.96□□□□□ -0.01
LMO3-231ENST00000544754 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
LMO3-231ENST00000544754 ZBTB12Q9Y330 459 aaPredicted RBP14.96□□□□□ -0.01
LMO3-231ENST00000544754 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
LMO3-231ENST00000544754 ZNF541Q9H0D2 1346 aa14.95□□□□□ -0.02
LMO3-231ENST00000544754 NAV1Q8NEY1 1877 aa14.95□□□□□ -0.02
LMO3-231ENST00000544754 GPR75-ASB3A0A0A6YYF3 556 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms