RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 TAF1P21675 1872 aa11.55□□□□□ -0.56
YBX3-215ENST00000544504 HIP1O00291 1037 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 CDC45O75419 566 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 ARID4AP29374 1257 aaPredicted RBP11.54□□□□□ -0.56
YBX3-215ENST00000544504 ZNF157P51786 506 aaPredicted RBP11.54□□□□□ -0.56
YBX3-215ENST00000544504 DPP8Q6V1X1 898 aaPredicted RBP11.54□□□□□ -0.56
YBX3-215ENST00000544504 ZNF804AQ7Z570 1209 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
YBX3-215ENST00000544504 C2orf69Q8N8R5 385 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 HAUS7Q99871 368 aa11.54□□□□□ -0.56
YBX3-215ENST00000544504 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.54□□□□□ -0.56
YBX3-215ENST00000544504 COL4A1P02462 1669 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 H7C1D1 291 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 IGSF3O75054 1194 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 UFL1O94874 794 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 SDSP20132 328 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 ADORA1P30542 326 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 GPSM2P81274 684 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 TTF1Q15361 905 aaPredicted RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 CCDC102BQ68D86 513 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 TRPM4Q8TD43 1214 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 RTFDC1Q9BY42 306 aaPredicted RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 GBA2Q9HCG7 927 aaPredicted RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 CNOT7Q9UIV1 285 aaKnown RBP11.53□□□□□ -0.56
YBX3-215ENST00000544504 MED23Q9ULK4 1368 aa11.53□□□□□ -0.56
YBX3-215ENST00000544504 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
YBX3-215ENST00000544504 TSHZ3Q63HK5 1081 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 FBXO33Q7Z6M2 555 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 SLC51AQ86UW1 340 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 TBC1D16Q8TBP0 767 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 RILPL2Q969X0 211 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 CSRNP1Q96S65 589 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 DENND2AQ9ULE3 1009 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 PDS5AQ29RF7 1337 aaKnown RBP11.52□□□□□ -0.57
YBX3-215ENST00000544504 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 CENPFP49454 3210 aa11.52□□□□□ -0.57
YBX3-215ENST00000544504 HTTP42858 3142 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
YBX3-215ENST00000544504 RAD17O75943 681 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 SLC10A3P09131 477 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 PHKA1P46020 1223 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
YBX3-215ENST00000544504 KRT26Q7Z3Y9 468 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 RUFY2Q8WXA3 655 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 DNAJC2Q99543 621 aaKnown RBP11.51□□□□□ -0.57
YBX3-215ENST00000544504 ZC3H12CQ9C0D7 883 aaKnown RBP11.51□□□□□ -0.57
YBX3-215ENST00000544504 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
YBX3-215ENST00000544504 BRCA2P51587 3418 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 G3V3G9 751 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 ZFYP08048 801 aaPredicted RBP11.5□□□□□ -0.57
YBX3-215ENST00000544504 BCAMP50895 628 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 DCAF8Q5TAQ9 597 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 KBTBD3Q8NAB2 608 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 DPF2Q92785 391 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 FAM84BQ96KN1 310 aaPredicted RBP11.5□□□□□ -0.57
YBX3-215ENST00000544504 FSD1Q9BTV5 496 aa11.5□□□□□ -0.57
YBX3-215ENST00000544504 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
YBX3-215ENST00000544504 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
YBX3-215ENST00000544504 SNAP23O00161 211 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 GYG1P46976 350 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 ZGPATQ8N5A5 531 aaKnown RBP11.49□□□□□ -0.57
YBX3-215ENST00000544504 SPATA5Q8NB90 893 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 DCPSQ96C86 337 aaKnown RBP11.49□□□□□ -0.57
YBX3-215ENST00000544504 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 POLLQ9UGP5 575 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 HDAC9Q9UKV0 1011 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 DUOX1Q9NRD9 1551 aa11.49□□□□□ -0.57
YBX3-215ENST00000544504 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 SHTN1A0MZ66 631 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 GOLIM4O00461 696 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 MCAMP43121 646 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 SPTY2D1Q68D10 685 aaPredicted RBP11.48□□□□□ -0.57
YBX3-215ENST00000544504 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 TDRD7Q8NHU6 1098 aaKnown RBP11.48□□□□□ -0.57
YBX3-215ENST00000544504 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 IRS2Q9Y4H2 1338 aa11.48□□□□□ -0.57
YBX3-215ENST00000544504 SZT2Q5T011 3432 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 RAD50Q92878 1312 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 YDJCA8MPS7 323 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 REC8O95072 547 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 IL1R1P14778 569 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 ZAP70P43403 619 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 MAP3K12Q12852 859 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 C8orf34Q49A92 452 aa11.47□□□□□ -0.57
YBX3-215ENST00000544504 TBC1D10BQ4KMP7 808 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms