RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 KRT26Q7Z3Y9 468 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 USP48Q86UV5 1035 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 SULF1Q8IWU6 871 aa16.79■□□□□ 0.28
LTBR-213ENST00000544454 PRMT6Q96LA8 375 aaPredicted RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 GLIS2Q9BZE0 524 aaPredicted RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
LTBR-213ENST00000544454 MYO1BO43795 1136 aa16.78■□□□□ 0.28
LTBR-213ENST00000544454 MCAMP43121 646 aa16.78■□□□□ 0.28
LTBR-213ENST00000544454 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
LTBR-213ENST00000544454 TEKT1Q969V4 418 aa16.78■□□□□ 0.28
LTBR-213ENST00000544454 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
LTBR-213ENST00000544454 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
LTBR-213ENST00000544454 TRAF5O00463 557 aa16.77■□□□□ 0.28
LTBR-213ENST00000544454 PRDX5P30044 214 aa16.77■□□□□ 0.28
LTBR-213ENST00000544454 ABCF2Q9UG63 623 aa16.77■□□□□ 0.28
LTBR-213ENST00000544454 IGSF3O75054 1194 aa16.76■□□□□ 0.27
LTBR-213ENST00000544454 PI16Q6UXB8 463 aa16.76■□□□□ 0.27
LTBR-213ENST00000544454 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
LTBR-213ENST00000544454 RWDD1Q9H446 243 aaPredicted RBP16.76■□□□□ 0.27
LTBR-213ENST00000544454 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
LTBR-213ENST00000544454 PCDHAC2Q9Y5I4 1007 aa16.76■□□□□ 0.27
LTBR-213ENST00000544454 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
LTBR-213ENST00000544454 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
LTBR-213ENST00000544454 ERICH6Q7L0X2 663 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.75■□□□□ 0.27
LTBR-213ENST00000544454 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
LTBR-213ENST00000544454 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 CEP350Q5VT06 3117 aa16.75■□□□□ 0.27
LTBR-213ENST00000544454 ADM5C9JUS6 153 aa16.74■□□□□ 0.27
LTBR-213ENST00000544454 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
LTBR-213ENST00000544454 CST9Q5W186 159 aa16.74■□□□□ 0.27
LTBR-213ENST00000544454 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
LTBR-213ENST00000544454 DZIP1Q86YF9 867 aaKnown RBP16.74■□□□□ 0.27
LTBR-213ENST00000544454 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
LTBR-213ENST00000544454 CYP2E1P05181 493 aaPredicted RBP16.73■□□□□ 0.27
LTBR-213ENST00000544454 ZAP70P43403 619 aa16.73■□□□□ 0.27
LTBR-213ENST00000544454 IRX6P78412 446 aaPredicted RBP16.73■□□□□ 0.27
LTBR-213ENST00000544454 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
LTBR-213ENST00000544454 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
LTBR-213ENST00000544454 LRP2BPQ9P2M1 347 aa16.73■□□□□ 0.27
LTBR-213ENST00000544454 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
LTBR-213ENST00000544454 CLRN2A0PK11 232 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 CELF2O95319 508 aaKnown RBP16.72■□□□□ 0.27
LTBR-213ENST00000544454 ATP5JP18859 108 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 GSTO1P78417 241 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 MECOMQ03112 1051 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 DLK2Q6UY11 383 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 DEFB129Q9H1M3 183 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 PPP2R3BQ9Y5P8 575 aa16.72■□□□□ 0.27
LTBR-213ENST00000544454 AOX1Q06278 1338 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 LDHCP07864 332 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 NSUN4Q96CB9 384 aaKnown RBP16.71■□□□□ 0.27
LTBR-213ENST00000544454 VEZTQ9HBM0 779 aa16.71■□□□□ 0.27
LTBR-213ENST00000544454 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
LTBR-213ENST00000544454 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
LTBR-213ENST00000544454 GAKO14976 1311 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 IGHDP01880 384 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 HTRA3P83110 453 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
LTBR-213ENST00000544454 TMED8Q6PL24 325 aaPredicted RBP16.7■□□□□ 0.26
LTBR-213ENST00000544454 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 ZNF384Q8TF68 577 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 ZNF408Q9H9D4 720 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
LTBR-213ENST00000544454 GPR75-ASB3A0A0A6YYF3 556 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 TNNI2P48788 182 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 RASA3Q14644 834 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 DNAJC5GQ8N7S2 189 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 C2orf69Q8N8R5 385 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 PIH1D3Q9NQM4 214 aaKnown RBP16.69■□□□□ 0.26
LTBR-213ENST00000544454 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
LTBR-213ENST00000544454 NF2P35240 595 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 FKBP1BP68106 108 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 PRAMEF18Q5VWM3 479 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 HAUS7Q99871 368 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 ANTXR1Q9H6X2 564 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
LTBR-213ENST00000544454 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
LTBR-213ENST00000544454 TCP10L2B9ZVM9 353 aa16.67■□□□□ 0.26
LTBR-213ENST00000544454 IDH1O75874 414 aaKnown RBP16.67■□□□□ 0.26
LTBR-213ENST00000544454 MAP4K4O95819 1239 aaPredicted RBP16.67■□□□□ 0.26
LTBR-213ENST00000544454 MAP3K12Q12852 859 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms