RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
SP140-213ENST00000543928 PDE1AP54750 535 aa16.6■□□□□ 0.25
SP140-213ENST00000543928 TBC1D10BQ4KMP7 808 aaPredicted RBP16.6■□□□□ 0.25
SP140-213ENST00000543928 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
SP140-213ENST00000543928 SPTY2D1Q68D10 685 aaPredicted RBP16.6■□□□□ 0.25
SP140-213ENST00000543928 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
SP140-213ENST00000543928 HAUS7Q99871 368 aa16.6■□□□□ 0.25
SP140-213ENST00000543928 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
SP140-213ENST00000543928 ERC2O15083 957 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 EGFRP00533 1210 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 PDE4AP27815 886 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 MMP14P50281 582 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 PI4K2BQ8TCG2 481 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
SP140-213ENST00000543928 LRP2BPQ9P2M1 347 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
SP140-213ENST00000543928 GOLIM4O00461 696 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 KIF3CO14782 793 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 USP50Q70EL3 339 aaPredicted RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 DZIP1Q86YF9 867 aaKnown RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 PLEKHM2Q8IWE5 1019 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
SP140-213ENST00000543928 PAG1Q9NWQ8 432 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 RAI14Q9P0K7 980 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 MAST3O60307 1309 aa16.58■□□□□ 0.24
SP140-213ENST00000543928 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
SP140-213ENST00000543928 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
SP140-213ENST00000543928 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
SP140-213ENST00000543928 DIXDC1Q155Q3 683 aa16.57■□□□□ 0.24
SP140-213ENST00000543928 CFAP100Q494V2 611 aa16.57■□□□□ 0.24
SP140-213ENST00000543928 SERPINA10Q9UK55 444 aa16.57■□□□□ 0.24
SP140-213ENST00000543928 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
SP140-213ENST00000543928 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
SP140-213ENST00000543928 AOX1Q06278 1338 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
SP140-213ENST00000543928 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 POTEJP0CG39 1038 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 CRKP46108 304 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 HDLBPQ00341 1268 aaKnown RBP16.56■□□□□ 0.24
SP140-213ENST00000543928 MECOMQ03112 1051 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 DLGAP5Q15398 846 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
SP140-213ENST00000543928 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
SP140-213ENST00000543928 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 MTMR14Q8NCE2 650 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 ZNF384Q8TF68 577 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 NSUN4Q96CB9 384 aaKnown RBP16.55■□□□□ 0.24
SP140-213ENST00000543928 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
SP140-213ENST00000543928 MRIQ9BWK5 157 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
SP140-213ENST00000543928 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 WNT10BO00744 389 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 NAA16Q6N069 864 aaPredicted RBP16.54■□□□□ 0.24
SP140-213ENST00000543928 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
SP140-213ENST00000543928 CLEC11AQ9Y240 323 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 DAGLAQ9Y4D2 1042 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
SP140-213ENST00000543928 ASTN2O75129 1339 aaPredicted RBP16.53■□□□□ 0.24
SP140-213ENST00000543928 IGSF3O75054 1194 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 GSTO1P78417 241 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
SP140-213ENST00000543928 GAKO14976 1311 aa16.52■□□□□ 0.24
SP140-213ENST00000543928 LDHCP07864 332 aa16.52■□□□□ 0.24
SP140-213ENST00000543928 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.24
SP140-213ENST00000543928 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.24
SP140-213ENST00000543928 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.24
SP140-213ENST00000543928 FAM163AQ96GL9 167 aaPredicted RBP16.52■□□□□ 0.24
SP140-213ENST00000543928 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 MYO1BO43795 1136 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 CYP7A1P22680 504 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 ANGEL2Q5VTE6 544 aaKnown RBP16.51■□□□□ 0.23
SP140-213ENST00000543928 KBTBD3Q8NAB2 608 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
SP140-213ENST00000543928 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 PGAP2Q9UHJ9 254 aa16.51■□□□□ 0.23
SP140-213ENST00000543928 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 TOMM70O94826 608 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 PDE6AP16499 860 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
SP140-213ENST00000543928 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
SP140-213ENST00000543928 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms