RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ZNF512BQ96KM6 892 aaPredicted RBP7.68□□□□□ -1.18
LTBR-212ENST00000543542 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
LTBR-212ENST00000543542 NDUFB9Q9Y6M9 179 aa7.68□□□□□ -1.18
LTBR-212ENST00000543542 PDS5AQ29RF7 1337 aaKnown RBP7.68□□□□□ -1.18
LTBR-212ENST00000543542 TTC41PQ6P2S7 1318 aa7.68□□□□□ -1.18
LTBR-212ENST00000543542 COL1A1P02452 1464 aaPredicted RBP7.68□□□□□ -1.18
LTBR-212ENST00000543542 TRIM6-TRIM34B2RNG4 842 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 POTECB2RU33 542 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 MAP4K4O95819 1239 aaPredicted RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 CYP2E1P05181 493 aaPredicted RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 LDHCP07864 332 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 PRDX5P30044 214 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 CRKP46108 304 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 MAP3K12Q12852 859 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 CFAP100Q494V2 611 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 NAA16Q6N069 864 aaPredicted RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 OTUD7AQ8TE49 926 aaPredicted RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.67□□□□□ -1.18
LTBR-212ENST00000543542 DCPSQ96C86 337 aaKnown RBP7.67□□□□□ -1.18
LTBR-212ENST00000543542 GMLQ99445 158 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 PAG1Q9NWQ8 432 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 TMOD2Q9NZR1 351 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 AKAP11Q9UKA4 1901 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 SALL1Q9NSC2 1324 aa7.67□□□□□ -1.18
LTBR-212ENST00000543542 MAST2Q6P0Q8 1798 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 MYH2Q9UKX2 1941 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 KIF3CO14782 793 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 ZNF280AP59817 542 aaPredicted RBP7.66□□□□□ -1.18
LTBR-212ENST00000543542 MECOMQ03112 1051 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 GRIK5Q16478 980 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 ZSCAN25Q6NSZ9 544 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 RILPL2Q969X0 211 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 HAUS7Q99871 368 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.66□□□□□ -1.18
LTBR-212ENST00000543542 ANTXR1Q9H6X2 564 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 VEZTQ9HBM0 779 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 PIH1D3Q9NQM4 214 aaKnown RBP7.66□□□□□ -1.18
LTBR-212ENST00000543542 ADAMTSL1Q8N6G6 1762 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 ECM29Q5VYK3 1845 aa7.66□□□□□ -1.18
LTBR-212ENST00000543542 MYO5AQ9Y4I1 1855 aaKnown RBP7.66□□□□□ -1.18
LTBR-212ENST00000543542 CLRN2A0PK11 232 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 WNT10BO00744 389 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 ZBTB22O15209 634 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 TOMM70O94826 608 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 EGFRP00533 1210 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 POTEIP0CG38 1075 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 POTEJP0CG39 1038 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 CYP7A1P22680 504 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 PDE1AP54750 535 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 LRRFIP1Q32MZ4 808 aaKnown RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 NBPF9Q3BBW0 867 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 ANGEL2Q5VTE6 544 aaKnown RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 MAP1SQ66K74 1059 aaPredicted RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 CHADLQ6NUI6 762 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 HHIPL2Q6UWX4 724 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 MAGEB6Q8N7X4 407 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 SMC1BQ8NDV3 1235 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 EDC3Q96F86 508 aaKnown RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 FSD1Q9BTV5 496 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 TDRD3Q9H7E2 651 aaKnown RBP7.65□□□□□ -1.18
LTBR-212ENST00000543542 GGA3Q9NZ52 723 aa7.65□□□□□ -1.18
LTBR-212ENST00000543542 MYH7P12883 1935 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 DOCK2Q92608 1830 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 MROH7-TTC4A0A0A0MT08 1334 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 AOX1Q06278 1338 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 SPDYE2BA6NHP3 402 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 BAG3O95817 575 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 SPDYE6P0CI01 402 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 BTDP43251 543 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 TNNI2P48788 182 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 RGS3P49796 1198 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 HIRAP54198 1017 aaPredicted RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 SLC9C2Q5TAH2 1124 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 APOBEC3FQ8IUX4 373 aaKnown RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 RBM46Q8TBY0 533 aaKnown RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 PI4K2BQ8TCG2 481 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 ZC3H15Q8WU90 426 aaKnown RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 NSUN4Q96CB9 384 aaKnown RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 PRMT6Q96LA8 375 aaPredicted RBP7.64□□□□□ -1.19
LTBR-212ENST00000543542 ZNF408Q9H9D4 720 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 USP40Q9NVE5 1235 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 STAP2Q9UGK3 403 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 DAGLAQ9Y4D2 1042 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 PCDHAC2Q9Y5I4 1007 aa7.64□□□□□ -1.19
LTBR-212ENST00000543542 ASTN2O75129 1339 aaPredicted RBP7.63□□□□□ -1.19
LTBR-212ENST00000543542 SALL3Q9BXA9 1300 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 MAGEB6P1A0A0J9YX57 407 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 TCP10L2B9ZVM9 353 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 IGSF3O75054 1194 aa7.63□□□□□ -1.19
LTBR-212ENST00000543542 PDE6AP16499 860 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms