RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 ITGBL1O95965 494 aaPredicted RBP12.15□□□□□ -0.46
VEGFB-204ENST00000543462 CYP2E1P05181 493 aaPredicted RBP12.15□□□□□ -0.46
VEGFB-204ENST00000543462 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 ATP5JP18859 108 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 OTUD7AQ8TE49 926 aaPredicted RBP12.15□□□□□ -0.46
VEGFB-204ENST00000543462 RWDD1Q9H446 243 aaPredicted RBP12.15□□□□□ -0.46
VEGFB-204ENST00000543462 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
VEGFB-204ENST00000543462 TTF2Q9UNY4 1162 aaKnown RBP12.15□□□□□ -0.46
VEGFB-204ENST00000543462 THSD7BQ9C0I4 1608 aa12.15□□□□□ -0.47
VEGFB-204ENST00000543462 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 MAST3O60307 1309 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 IGSF3O75054 1194 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
VEGFB-204ENST00000543462 NUCB1Q02818 461 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 FSTL1Q12841 308 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 GORABQ5T7V8 394 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
VEGFB-204ENST00000543462 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
VEGFB-204ENST00000543462 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 FRAT2O75474 233 aaPredicted RBP12.13□□□□□ -0.47
VEGFB-204ENST00000543462 ZAP70P43403 619 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 CRKP46108 304 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 CFAP100Q494V2 611 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 PI4K2BQ8TCG2 481 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
VEGFB-204ENST00000543462 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
VEGFB-204ENST00000543462 PIH1D3Q9NQM4 214 aaKnown RBP12.13□□□□□ -0.47
VEGFB-204ENST00000543462 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 STAP2Q9UGK3 403 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
VEGFB-204ENST00000543462 TTC41PQ6P2S7 1318 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 MYH1P12882 1939 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 APOBEC3HQ6NTF7 200 aaKnown RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
VEGFB-204ENST00000543462 HAUS7Q99871 368 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 ANTXR1Q9H6X2 564 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 SNRKQ9NRH2 765 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 ECHDC1Q9NTX5 307 aa12.12□□□□□ -0.47
VEGFB-204ENST00000543462 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
VEGFB-204ENST00000543462 C1QTNF8P60827 252 aa12.11□□□□□ -0.47
VEGFB-204ENST00000543462 MECOMQ03112 1051 aa12.11□□□□□ -0.47
VEGFB-204ENST00000543462 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
VEGFB-204ENST00000543462 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
VEGFB-204ENST00000543462 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
VEGFB-204ENST00000543462 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
VEGFB-204ENST00000543462 COL2A1P02458 1487 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-204ENST00000543462 CNTNAP1P78357 1384 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 MX1P20591 662 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 DLGAP5Q15398 846 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
VEGFB-204ENST00000543462 ANKRD45Q5TZF3 282 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 SPTY2D1Q68D10 685 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-204ENST00000543462 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
VEGFB-204ENST00000543462 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
VEGFB-204ENST00000543462 LNPKQ9C0E8 428 aa12.1□□□□□ -0.47
VEGFB-204ENST00000543462 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
VEGFB-204ENST00000543462 GPR75-ASB3A0A0A6YYF3 556 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 PDE4AP27815 886 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 PDE1AP54750 535 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 RHBDL3P58872 404 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 TMED8Q6PL24 325 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-204ENST00000543462 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
VEGFB-204ENST00000543462 ABCF2Q9UG63 623 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 ATAD5Q96QE3 1844 aa12.09□□□□□ -0.47
VEGFB-204ENST00000543462 TCRBV5S4A2TA0A5A2 114 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 TRAF5O00463 557 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
VEGFB-204ENST00000543462 FKBP1CQ5VVH2 108 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
VEGFB-204ENST00000543462 APOBEC3FQ8IUX4 373 aaKnown RBP12.08□□□□□ -0.48
VEGFB-204ENST00000543462 PLEKHM2Q8IWE5 1019 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 BOLA2Q9H3K6 86 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 PAG1Q9NWQ8 432 aa12.08□□□□□ -0.48
VEGFB-204ENST00000543462 ATRNL1Q5VV63 1379 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
VEGFB-204ENST00000543462 GOLIM4O00461 696 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms