RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 TDRD3Q9H7E2 651 aaKnown RBP23.13■■□□□ 1.29
TMED3-204ENST00000543455 VEZTQ9HBM0 779 aa23.13■■□□□ 1.29
TMED3-204ENST00000543455 ZNF70Q9UC06 446 aaPredicted RBP23.13■■□□□ 1.29
TMED3-204ENST00000543455 MYO1BO43795 1136 aa23.12■■□□□ 1.29
TMED3-204ENST00000543455 PHKA1P46020 1223 aa23.12■■□□□ 1.29
TMED3-204ENST00000543455 PRKG1Q13976 671 aa23.12■■□□□ 1.29
TMED3-204ENST00000543455 PPP2R3BQ9Y5P8 575 aa23.12■■□□□ 1.29
TMED3-204ENST00000543455 TFCP2Q12800 502 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 BEGAINQ9BUH8 593 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 AKAP11Q9UKA4 1901 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 NF2P35240 595 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 TIMM10P62072 90 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 HDLBPQ00341 1268 aaKnown RBP23.11■■□□□ 1.29
TMED3-204ENST00000543455 TTLL12Q14166 644 aaPredicted RBP23.11■■□□□ 1.29
TMED3-204ENST00000543455 RASA3Q14644 834 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 LDLRAD1Q5T700 205 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 CDAN1Q8IWY9 1227 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
TMED3-204ENST00000543455 CSRNP1Q96S65 589 aa23.11■■□□□ 1.29
TMED3-204ENST00000543455 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
TMED3-204ENST00000543455 NBPF12Q5TAG4 269 aaPredicted RBP23.1■■□□□ 1.29
TMED3-204ENST00000543455 OTOFQ9HC10 1997 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 ZBTB22O15209 634 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 MAP3K11Q16584 847 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 TEPSINQ96N21 525 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 MRIQ9BWK5 157 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 C1orf115Q9H7X2 142 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 SUGT1Q9Y2Z0 365 aa23.09■■□□□ 1.29
TMED3-204ENST00000543455 ZBTB7BO15156 539 aaPredicted RBP23.08■■□□□ 1.29
TMED3-204ENST00000543455 CA12O43570 354 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 POLA2Q14181 598 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 CCDC102BQ68D86 513 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 APOBEC3HQ6NTF7 200 aaKnown RBP23.08■■□□□ 1.29
TMED3-204ENST00000543455 FTSJ3Q8IY81 847 aaKnown RBP23.08■■□□□ 1.29
TMED3-204ENST00000543455 WDR66Q8TBY9 1149 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 TEKT1Q969V4 418 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 ZDHHC15Q96MV8 337 aa23.08■■□□□ 1.29
TMED3-204ENST00000543455 ANGEL1Q9UNK9 670 aaKnown RBP23.08■■□□□ 1.29
TMED3-204ENST00000543455 A0A1B0GUL7 405 aa23.07■■□□□ 1.28
TMED3-204ENST00000543455 PRDX5P30044 214 aa23.07■■□□□ 1.28
TMED3-204ENST00000543455 ARMC9Q7Z3E5 817 aa23.07■■□□□ 1.28
TMED3-204ENST00000543455 ITPRIPQ8IWB1 547 aa23.07■■□□□ 1.28
TMED3-204ENST00000543455 TCP10L2B9ZVM9 353 aa23.06■■□□□ 1.28
TMED3-204ENST00000543455 CACNB3P54284 484 aa23.06■■□□□ 1.28
TMED3-204ENST00000543455 PANK1Q8TE04 598 aa23.06■■□□□ 1.28
TMED3-204ENST00000543455 SSH3Q8TE77 659 aa23.06■■□□□ 1.28
TMED3-204ENST00000543455 LAMB1P07942 1786 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 HHIPL2Q6UWX4 724 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 XAGE2Q96GT9 111 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 RNF186Q9NXI6 227 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 MAST3O60307 1309 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 SALL1Q9NSC2 1324 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 SEMA3EO15041 775 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 TNFAIP1Q13829 316 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 RASGRF1Q13972 1273 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 CLMNQ96JQ2 1002 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 TMEM39BQ9GZU3 492 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
TMED3-204ENST00000543455 USP2O75604 605 aaPredicted RBP23.04■■□□□ 1.28
TMED3-204ENST00000543455 DIXDC1Q155Q3 683 aa23.04■■□□□ 1.28
TMED3-204ENST00000543455 SUPT20HL1Q3ZLR7 823 aa23.04■■□□□ 1.28
TMED3-204ENST00000543455 GNL3LQ9NVN8 582 aaKnown RBP23.04■■□□□ 1.28
TMED3-204ENST00000543455 SAGE1Q9NXZ1 904 aa23.04■■□□□ 1.28
TMED3-204ENST00000543455 AKAP2Q9Y2D5 859 aa23.04■■□□□ 1.28
TMED3-204ENST00000543455 MKRN3Q13064 507 aaKnown RBP23.03■■□□□ 1.28
TMED3-204ENST00000543455 DAGLAQ9Y4D2 1042 aa23.03■■□□□ 1.28
TMED3-204ENST00000543455 MYH2Q9UKX2 1941 aa23.03■■□□□ 1.28
TMED3-204ENST00000543455 TRPA1O75762 1119 aa23.02■■□□□ 1.28
TMED3-204ENST00000543455 PDS5AQ29RF7 1337 aaKnown RBP23.02■■□□□ 1.27
TMED3-204ENST00000543455 PPP1R12BO60237 982 aaPredicted RBP23.01■■□□□ 1.27
TMED3-204ENST00000543455 G3BP1Q13283 466 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMED3-204ENST00000543455 SPRYD7Q5W111 196 aa23.01■■□□□ 1.27
TMED3-204ENST00000543455 LDHBP07195 334 aaKnown RBP23■■□□□ 1.27
TMED3-204ENST00000543455 NEUROD6Q96NK8 337 aa23■■□□□ 1.27
TMED3-204ENST00000543455 MVPQ14764 893 aaKnown RBP22.99■■□□□ 1.27
TMED3-204ENST00000543455 FKBP1CQ5VVH2 108 aa22.99■■□□□ 1.27
TMED3-204ENST00000543455 REM2Q8IYK8 340 aaPredicted RBP22.99■■□□□ 1.27
TMED3-204ENST00000543455 CAPN15O75808 1086 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 GJA5P36382 358 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 TM4SF4P48230 202 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 CDC42EP5Q6NZY7 148 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 CEP85Q6P2H3 762 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 PI16Q6UXB8 463 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 NOP58Q9Y2X3 529 aaKnown RBP22.98■■□□□ 1.27
TMED3-204ENST00000543455 IREB2P48200 963 aaKnown RBP22.98■■□□□ 1.27
TMED3-204ENST00000543455 TNNI2P48788 182 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 FAM83AQ86UY5 434 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 ZNF384Q8TF68 577 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 WNK4Q96J92 1243 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 HMG20BQ9P0W2 317 aa22.98■■□□□ 1.27
TMED3-204ENST00000543455 UNCXA6NJT0 531 aa22.97■■□□□ 1.27
TMED3-204ENST00000543455 ARID4AP29374 1257 aaPredicted RBP22.97■■□□□ 1.27
TMED3-204ENST00000543455 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.97■■□□□ 1.27
TMED3-204ENST00000543455 RPAP1Q9BWH6 1393 aaPredicted RBP22.96■■□□□ 1.27
TMED3-204ENST00000543455 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
TMED3-204ENST00000543455 NFIAQ12857 509 aa22.96■■□□□ 1.27
TMED3-204ENST00000543455 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
TMED3-204ENST00000543455 GPR108Q9NPR9 543 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms