RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 WNK4Q96J92 1243 aa23.41■■□□□ 1.34
LTBR-211ENST00000543190 TEPSINQ96N21 525 aa23.41■■□□□ 1.34
LTBR-211ENST00000543190 TESPA1A2RU30 521 aaPredicted RBP23.4■■□□□ 1.34
LTBR-211ENST00000543190 TBC1D8O95759 1140 aa23.4■■□□□ 1.34
LTBR-211ENST00000543190 METTL24Q5JXM2 366 aa23.4■■□□□ 1.34
LTBR-211ENST00000543190 CRKP46108 304 aa23.39■■□□□ 1.33
LTBR-211ENST00000543190 RBM5P52756 815 aaKnown RBP eCLIP23.39■■□□□ 1.333e-10■■■■■ 45.8
LTBR-211ENST00000543190 PUM3Q15397 648 aaKnown RBP23.39■■□□□ 1.33
LTBR-211ENST00000543190 VPS37DQ86XT2 251 aa23.39■■□□□ 1.33
LTBR-211ENST00000543190 IFNL1Q8IU54 200 aa23.39■■□□□ 1.33
LTBR-211ENST00000543190 VEZTQ9HBM0 779 aa23.39■■□□□ 1.33
LTBR-211ENST00000543190 JAG2Q9Y219 1238 aa23.39■■□□□ 1.33
LTBR-211ENST00000543190 EYA2O00167 538 aa23.38■■□□□ 1.33
LTBR-211ENST00000543190 PRKG1Q13976 671 aa23.38■■□□□ 1.33
LTBR-211ENST00000543190 CLMNQ96JQ2 1002 aa23.38■■□□□ 1.33
LTBR-211ENST00000543190 ZDHHC15Q96MV8 337 aa23.38■■□□□ 1.33
LTBR-211ENST00000543190 MAST3O60307 1309 aa23.37■■□□□ 1.33
LTBR-211ENST00000543190 CCER2I3L3R5 266 aa23.37■■□□□ 1.33
LTBR-211ENST00000543190 FKTNO75072 461 aa23.37■■□□□ 1.33
LTBR-211ENST00000543190 TDRD3Q9H7E2 651 aaKnown RBP23.37■■□□□ 1.33
LTBR-211ENST00000543190 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
LTBR-211ENST00000543190 CIAO1O76071 339 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 IFIT1P09914 478 aaKnown RBP23.36■■□□□ 1.33
LTBR-211ENST00000543190 TNNI2P48788 182 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 HHIPL2Q6UWX4 724 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 FAM83AQ86UY5 434 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 LPIN2Q92539 896 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 TEKT1Q969V4 418 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 FZD1Q9UP38 647 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 HPS5Q9UPZ3 1129 aa23.36■■□□□ 1.33
LTBR-211ENST00000543190 RPAP1Q9BWH6 1393 aaPredicted RBP23.36■■□□□ 1.33
LTBR-211ENST00000543190 FBXO46Q6PJ61 603 aaPredicted RBP23.35■■□□□ 1.33
LTBR-211ENST00000543190 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
LTBR-211ENST00000543190 SMC4Q9NTJ3 1288 aa23.35■■□□□ 1.33
LTBR-211ENST00000543190 IGF2BP3O00425 579 aaKnown RBP eCLIP23.34■■□□□ 1.33
LTBR-211ENST00000543190 BCAMP50895 628 aa23.34■■□□□ 1.33
LTBR-211ENST00000543190 MKRN3Q13064 507 aaKnown RBP23.34■■□□□ 1.33
LTBR-211ENST00000543190 GRIK5Q16478 980 aa23.34■■□□□ 1.33
LTBR-211ENST00000543190 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
LTBR-211ENST00000543190 R3HDMLQ9H3Y0 253 aa23.34■■□□□ 1.33
LTBR-211ENST00000543190 RBBP6Q7Z6E9 1792 aaKnown RBP23.33■■□□□ 1.33
LTBR-211ENST00000543190 GJA5P36382 358 aa23.33■■□□□ 1.33
LTBR-211ENST00000543190 OTUD7BQ6GQQ9 843 aa23.33■■□□□ 1.33
LTBR-211ENST00000543190 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.33■■□□□ 1.33
LTBR-211ENST00000543190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.33■■□□□ 1.33
LTBR-211ENST00000543190 WDR66Q8TBY9 1149 aa23.33■■□□□ 1.33
LTBR-211ENST00000543190 ARHGAP45Q92619 1136 aa23.33■■□□□ 1.33
LTBR-211ENST00000543190 MS4A4AQ96JQ5 239 aa23.33■■□□□ 1.33
LTBR-211ENST00000543190 KIAA0100Q14667 2235 aaKnown RBP23.33■■□□□ 1.33
LTBR-211ENST00000543190 CENPFP49454 3210 aa23.32■■□□□ 1.32
LTBR-211ENST00000543190 APOBEC3HQ6NTF7 200 aaKnown RBP23.32■■□□□ 1.32
LTBR-211ENST00000543190 HOOK2Q96ED9 719 aa23.32■■□□□ 1.32
LTBR-211ENST00000543190 API5Q9BZZ5 524 aaKnown RBP23.32■■□□□ 1.32
LTBR-211ENST00000543190 UBTFL1P0CB47 393 aaPredicted RBP23.31■■□□□ 1.32
LTBR-211ENST00000543190 SLC5A1P13866 664 aa23.31■■□□□ 1.32
LTBR-211ENST00000543190 IQSEC3Q9UPP2 1182 aaPredicted RBP23.31■■□□□ 1.32
LTBR-211ENST00000543190 SALL1Q9NSC2 1324 aa23.31■■□□□ 1.32
LTBR-211ENST00000543190 FRAT2O75474 233 aaPredicted RBP23.3■■□□□ 1.32
LTBR-211ENST00000543190 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
LTBR-211ENST00000543190 TMEM39BQ9GZU3 492 aa23.3■■□□□ 1.32
LTBR-211ENST00000543190 SEMA3EO15041 775 aa23.29■■□□□ 1.32
LTBR-211ENST00000543190 PTPN18Q99952 460 aa23.29■■□□□ 1.32
LTBR-211ENST00000543190 COPRSQ9NQ92 184 aa23.29■■□□□ 1.32
LTBR-211ENST00000543190 TCP10L2B9ZVM9 353 aa23.28■■□□□ 1.32
LTBR-211ENST00000543190 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
LTBR-211ENST00000543190 VGLL4Q14135 290 aa23.28■■□□□ 1.32
LTBR-211ENST00000543190 INTS3Q68E01 1043 aaKnown RBP23.28■■□□□ 1.32
LTBR-211ENST00000543190 CDAN1Q8IWY9 1227 aa23.28■■□□□ 1.32
LTBR-211ENST00000543190 OPTNQ96CV9 577 aa23.28■■□□□ 1.32
LTBR-211ENST00000543190 ZCCHC17Q9NP64 241 aaKnown RBP23.28■■□□□ 1.32
LTBR-211ENST00000543190 PDS5AQ29RF7 1337 aaKnown RBP23.28■■□□□ 1.32
LTBR-211ENST00000543190 MYH2Q9UKX2 1941 aa23.27■■□□□ 1.32
LTBR-211ENST00000543190 IL15P40933 162 aaPredicted RBP23.27■■□□□ 1.32
LTBR-211ENST00000543190 RARSP54136 660 aaKnown RBP23.27■■□□□ 1.32
LTBR-211ENST00000543190 MTX1Q13505 466 aa23.27■■□□□ 1.32
LTBR-211ENST00000543190 TMOD2Q9NZR1 351 aa23.27■■□□□ 1.32
LTBR-211ENST00000543190 NOB1Q9ULX3 412 aaKnown RBP23.27■■□□□ 1.32
LTBR-211ENST00000543190 SPDYE5A6NIY4 337 aa23.26■■□□□ 1.31
LTBR-211ENST00000543190 GTF2A2P52657 109 aa23.26■■□□□ 1.31
LTBR-211ENST00000543190 CRHR2Q13324 411 aa23.26■■□□□ 1.31
LTBR-211ENST00000543190 ERO1AQ96HE7 468 aa23.26■■□□□ 1.31
LTBR-211ENST00000543190 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
LTBR-211ENST00000543190 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
LTBR-211ENST00000543190 OTOP1Q7RTM1 612 aa23.25■■□□□ 1.31
LTBR-211ENST00000543190 ELP3Q9H9T3 547 aa23.25■■□□□ 1.31
LTBR-211ENST00000543190 GNL3LQ9NVN8 582 aaKnown RBP23.25■■□□□ 1.31
LTBR-211ENST00000543190 CSADQ9Y600 493 aa23.25■■□□□ 1.31
LTBR-211ENST00000543190 AK9Q5TCS8 1911 aa23.25■■□□□ 1.31
LTBR-211ENST00000543190 SOX10P56693 466 aa23.24■■□□□ 1.31
LTBR-211ENST00000543190 ERO1BQ86YB8 467 aa23.24■■□□□ 1.31
LTBR-211ENST00000543190 MKI67P46013 3256 aaKnown RBP23.23■■□□□ 1.31
LTBR-211ENST00000543190 DCAF15Q66K64 600 aa23.23■■□□□ 1.31
LTBR-211ENST00000543190 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
LTBR-211ENST00000543190 BRI3BPQ8WY22 251 aa23.23■■□□□ 1.31
LTBR-211ENST00000543190 DENND2AQ9ULE3 1009 aa23.23■■□□□ 1.31
LTBR-211ENST00000543190 LRRFIP2Q9Y608 721 aaKnown RBP23.23■■□□□ 1.31
LTBR-211ENST00000543190 SNCAIPQ9Y6H5 919 aa23.23■■□□□ 1.31
LTBR-211ENST00000543190 BRCA2P51587 3418 aa23.22■■□□□ 1.31
LTBR-211ENST00000543190 SLC34A2O95436 690 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms