RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 CD209Q9NNX6 404 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
SRGAP1-205ENST00000542841 CLRN2A0PK11 232 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 F6X3S4 739 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 CWF19L2Q2TBE0 894 aaKnown RBP14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 NBPF12Q5TAG4 269 aaPredicted RBP14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 ZNF333Q96JL9 665 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 PTPN18Q99952 460 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 SRCIN1Q9C0H9 1055 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 VEZTQ9HBM0 779 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 COLQQ9Y215 455 aaPredicted RBP14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 MYH3P11055 1940 aa14.35□□□□□ -0.11
SRGAP1-205ENST00000542841 LAMB1P07942 1786 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 SPDYE2BA6NHP3 402 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 NEURL1BA8MQ27 555 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 F8W031 263 aaPredicted RBP14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 USP2O75604 605 aaPredicted RBP14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 SPDYE6P0CI01 402 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 GJA5P36382 358 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 CHRNDQ07001 517 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 SLC9C1Q4G0N8 1177 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 PCDHB15Q9Y5E8 787 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 PCDHAC2Q9Y5I4 1007 aa14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 KIAA0100Q14667 2235 aaKnown RBP14.34□□□□□ -0.11
SRGAP1-205ENST00000542841 H7C1W4 665 aa14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 SLC4A8Q2Y0W8 1093 aa14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.12
SRGAP1-205ENST00000542841 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
SRGAP1-205ENST00000542841 RASA3Q14644 834 aa14.32□□□□□ -0.12
SRGAP1-205ENST00000542841 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
SRGAP1-205ENST00000542841 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
SRGAP1-205ENST00000542841 ELP3Q9H9T3 547 aa14.32□□□□□ -0.12
SRGAP1-205ENST00000542841 CSF1RP07333 972 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 IL1R1P14778 569 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 CAP1Q01518 475 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 TNFAIP1Q13829 316 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 GCKRQ14397 625 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 PTCH2Q9Y6C5 1203 aa14.31□□□□□ -0.12
SRGAP1-205ENST00000542841 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 SNAP23O00161 211 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 TAF5LO75529 589 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 GNAI2P04899 355 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 MEIS3Q99687 375 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
SRGAP1-205ENST00000542841 CCL15-CCL14A0A0B4J2E2 113 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 HMMRO75330 724 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 IGHDP01880 384 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 GTF2A2P52657 109 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 CCL15Q16663 113 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 UTYO14607 1347 aa14.29□□□□□ -0.12
SRGAP1-205ENST00000542841 H0YGN5 161 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 MYCP01106 439 aaPredicted RBP14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 CASP7P55210 303 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 AOX1Q06278 1338 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
SRGAP1-205ENST00000542841 VGLL4Q14135 290 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 KIF22Q14807 665 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 CEP85Q6P2H3 762 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 OTUD5Q96G74 571 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 SERPINA10Q9UK55 444 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 CSADQ9Y600 493 aa14.27□□□□□ -0.13
SRGAP1-205ENST00000542841 GNRH1P01148 92 aa14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 TNNI2P48788 182 aa14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 MAP3K9P80192 1104 aa14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
SRGAP1-205ENST00000542841 GRM8O00222 908 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 TLR2O60603 784 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 MFSD14BQ5SR56 506 aa14.25□□□□□ -0.13
SRGAP1-205ENST00000542841 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms