RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 GNL3LQ9NVN8 582 aaKnown RBP21.68■■□□□ 1.06
LTBR-210ENST00000542830 MAST3O60307 1309 aa21.68■■□□□ 1.06
LTBR-210ENST00000542830 UBE2Q2LH0YL09 131 aa21.67■■□□□ 1.06
LTBR-210ENST00000542830 KIF23Q02241 960 aaPredicted RBP21.67■■□□□ 1.06
LTBR-210ENST00000542830 SUPT20HL1Q3ZLR7 823 aa21.67■■□□□ 1.06
LTBR-210ENST00000542830 DZIP1LQ8IYY4 767 aaKnown RBP21.67■■□□□ 1.06
LTBR-210ENST00000542830 MRIQ9BWK5 157 aa21.67■■□□□ 1.06
LTBR-210ENST00000542830 SPDYE2Q495Y8 402 aa21.66■■□□□ 1.06
LTBR-210ENST00000542830 TEKT1Q969V4 418 aa21.66■■□□□ 1.06
LTBR-210ENST00000542830 ZNF70Q9UC06 446 aaPredicted RBP21.66■■□□□ 1.06
LTBR-210ENST00000542830 PPP1R12BO60237 982 aaPredicted RBP21.65■■□□□ 1.06
LTBR-210ENST00000542830 GRIK5Q16478 980 aa21.65■■□□□ 1.06
LTBR-210ENST00000542830 AKAP2Q9Y2D5 859 aa21.65■■□□□ 1.06
LTBR-210ENST00000542830 AOX1Q06278 1338 aa21.64■■□□□ 1.05
LTBR-210ENST00000542830 SEMA3EO15041 775 aa21.64■■□□□ 1.05
LTBR-210ENST00000542830 ZBTB22O15209 634 aa21.64■■□□□ 1.05
LTBR-210ENST00000542830 RASA3Q14644 834 aa21.64■■□□□ 1.05
LTBR-210ENST00000542830 TDRD3Q9H7E2 651 aaKnown RBP21.64■■□□□ 1.05
LTBR-210ENST00000542830 SAGE1Q9NXZ1 904 aa21.64■■□□□ 1.05
LTBR-210ENST00000542830 ANGEL1Q9UNK9 670 aaKnown RBP21.64■■□□□ 1.05
LTBR-210ENST00000542830 TNNI2P48788 182 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 PRKG1Q13976 671 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 MAP3K11Q16584 847 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 ZDHHC15Q96MV8 337 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 DENND2AQ9ULE3 1009 aa21.63■■□□□ 1.05
LTBR-210ENST00000542830 UNCXA6NJT0 531 aa21.62■■□□□ 1.05
LTBR-210ENST00000542830 LDLRAD1Q5T700 205 aa21.62■■□□□ 1.05
LTBR-210ENST00000542830 CSRNP1Q96S65 589 aa21.62■■□□□ 1.05
LTBR-210ENST00000542830 MYH13Q9UKX3 1938 aa21.62■■□□□ 1.05
LTBR-210ENST00000542830 HHIPL2Q6UWX4 724 aa21.61■■□□□ 1.05
LTBR-210ENST00000542830 ITPRIPQ8IWB1 547 aa21.61■■□□□ 1.05
LTBR-210ENST00000542830 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
LTBR-210ENST00000542830 PNMA6EA0A0J9YXQ4 647 aa21.6■■□□□ 1.05
LTBR-210ENST00000542830 A0A1B0GUL7 405 aa21.6■■□□□ 1.05
LTBR-210ENST00000542830 PHKA1P46020 1223 aa21.6■■□□□ 1.05
LTBR-210ENST00000542830 TFCP2Q12800 502 aa21.6■■□□□ 1.05
LTBR-210ENST00000542830 G3BP1Q13283 466 aaKnown RBP eCLIP21.6■■□□□ 1.05
LTBR-210ENST00000542830 NBPF12Q5TAG4 269 aaPredicted RBP21.6■■□□□ 1.05
LTBR-210ENST00000542830 CCDC102BQ68D86 513 aa21.6■■□□□ 1.05
LTBR-210ENST00000542830 ZGPATQ8N5A5 531 aaKnown RBP21.6■■□□□ 1.05
LTBR-210ENST00000542830 SALL1Q9NSC2 1324 aa21.59■■□□□ 1.05
LTBR-210ENST00000542830 SSC5DA1L4H1 1573 aa21.59■■□□□ 1.05
LTBR-210ENST00000542830 ADORA1P30542 326 aa21.59■■□□□ 1.05
LTBR-210ENST00000542830 IREB2P48200 963 aaKnown RBP21.59■■□□□ 1.05
LTBR-210ENST00000542830 TIMM10P62072 90 aa21.59■■□□□ 1.05
LTBR-210ENST00000542830 MVPQ14764 893 aaKnown RBP21.59■■□□□ 1.05
LTBR-210ENST00000542830 RNF186Q9NXI6 227 aa21.59■■□□□ 1.05
LTBR-210ENST00000542830 TCP10L2B9ZVM9 353 aa21.58■■□□□ 1.05
LTBR-210ENST00000542830 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.05
LTBR-210ENST00000542830 MS4A1P11836 297 aa21.58■■□□□ 1.05
LTBR-210ENST00000542830 RLBP1P12271 317 aa21.58■■□□□ 1.05
LTBR-210ENST00000542830 FKBP1CQ5VVH2 108 aa21.58■■□□□ 1.05
LTBR-210ENST00000542830 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.05
LTBR-210ENST00000542830 XAGE2Q96GT9 111 aa21.58■■□□□ 1.05
LTBR-210ENST00000542830 AKAP11Q9UKA4 1901 aa21.58■■□□□ 1.04
LTBR-210ENST00000542830 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
LTBR-210ENST00000542830 ZBTB7BO15156 539 aaPredicted RBP21.57■■□□□ 1.04
LTBR-210ENST00000542830 TRPA1O75762 1119 aa21.57■■□□□ 1.04
LTBR-210ENST00000542830 ATP8B2P98198 1209 aa21.57■■□□□ 1.04
LTBR-210ENST00000542830 POLA2Q14181 598 aa21.57■■□□□ 1.04
LTBR-210ENST00000542830 SLC10A4Q96EP9 437 aa21.57■■□□□ 1.04
LTBR-210ENST00000542830 SREBF2Q12772 1141 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 FAM83AQ86UY5 434 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 SSH3Q8TE77 659 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 TEPSINQ96N21 525 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 NEUROD6Q96NK8 337 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 FZD1Q9UP38 647 aa21.56■■□□□ 1.04
LTBR-210ENST00000542830 USP2O75604 605 aaPredicted RBP21.55■■□□□ 1.04
LTBR-210ENST00000542830 PRDX5P30044 214 aa21.55■■□□□ 1.04
LTBR-210ENST00000542830 TM4SF4P48230 202 aa21.55■■□□□ 1.04
LTBR-210ENST00000542830 SPRYD7Q5W111 196 aa21.55■■□□□ 1.04
LTBR-210ENST00000542830 ANKRD13AQ8IZ07 590 aa21.55■■□□□ 1.04
LTBR-210ENST00000542830 TMEM39BQ9GZU3 492 aa21.55■■□□□ 1.04
LTBR-210ENST00000542830 ZBTB48P10074 688 aaPredicted RBP21.54■■□□□ 1.04
LTBR-210ENST00000542830 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
LTBR-210ENST00000542830 RASGRF1Q13972 1273 aa21.54■■□□□ 1.04
LTBR-210ENST00000542830 GORABQ5T7V8 394 aa21.54■■□□□ 1.04
LTBR-210ENST00000542830 HOOK2Q96ED9 719 aa21.54■■□□□ 1.04
LTBR-210ENST00000542830 DAGLAQ9Y4D2 1042 aa21.54■■□□□ 1.04
LTBR-210ENST00000542830 CAPN15O75808 1086 aa21.53■■□□□ 1.04
LTBR-210ENST00000542830 CACNB3P54284 484 aa21.53■■□□□ 1.04
LTBR-210ENST00000542830 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
LTBR-210ENST00000542830 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
LTBR-210ENST00000542830 CASP8AP2Q9UKL3 1982 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 RPAP1Q9BWH6 1393 aaPredicted RBP21.52■■□□□ 1.04
LTBR-210ENST00000542830 MANSC4A6NHS7 340 aaPredicted RBP21.52■■□□□ 1.04
LTBR-210ENST00000542830 INHBEP58166 350 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 OS9Q13438 667 aaPredicted RBP21.52■■□□□ 1.04
LTBR-210ENST00000542830 DIXDC1Q155Q3 683 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 SLF2Q8IX21 1173 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 WNK4Q96J92 1243 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 CLMNQ96JQ2 1002 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 GPR108Q9NPR9 543 aa21.52■■□□□ 1.04
LTBR-210ENST00000542830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.52■■□□□ 1.04
LTBR-210ENST00000542830 SURF6O75683 361 aaKnown RBP21.51■■□□□ 1.03
LTBR-210ENST00000542830 DZIP1Q86YF9 867 aaKnown RBP21.51■■□□□ 1.03
LTBR-210ENST00000542830 CDAN1Q8IWY9 1227 aa21.51■■□□□ 1.03
LTBR-210ENST00000542830 PANK1Q8TE04 598 aa21.51■■□□□ 1.03
LTBR-210ENST00000542830 ABCF2Q9UG63 623 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms