RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 TLR2O60603 784 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.62e-7■■□□□ 12.6
UBC-211ENST00000542416 VGLL4Q14135 290 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 BEND3Q5T5X7 828 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 ERO1BQ86YB8 467 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBC-211ENST00000542416 TEPSINQ96N21 525 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
UBC-211ENST00000542416 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 PTCH2Q9Y6C5 1203 aa11.32□□□□□ -0.6
UBC-211ENST00000542416 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 VAMP4O75379 141 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 HOXD10P28358 340 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 CRKP46108 304 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 SNAPC2Q13487 334 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
UBC-211ENST00000542416 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
UBC-211ENST00000542416 FRAT2O75474 233 aaPredicted RBP11.3□□□□□ -0.6
UBC-211ENST00000542416 LACTBP83111 547 aaPredicted RBP11.3□□□□□ -0.6
UBC-211ENST00000542416 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 DCAF15Q66K64 600 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 COLQQ9Y215 455 aaPredicted RBP11.3□□□□□ -0.6
UBC-211ENST00000542416 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 AOX1Q06278 1338 aa11.3□□□□□ -0.6
UBC-211ENST00000542416 GYG1P46976 350 aa11.29□□□□□ -0.6
UBC-211ENST00000542416 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
UBC-211ENST00000542416 MAST3O60307 1309 aa11.29□□□□□ -0.6
UBC-211ENST00000542416 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
UBC-211ENST00000542416 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 F6X3S4 739 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 PPATQ06203 517 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 PPIL2Q13356 520 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 EPHA10Q5JZY3 1008 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
UBC-211ENST00000542416 MYH3P11055 1940 aa11.27□□□□□ -0.6
UBC-211ENST00000542416 H0YGN5 161 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 IRF6O14896 467 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 CAPN2P17655 700 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 CAP1Q01518 475 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 HTATIP2Q9BUP3 242 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 ZNF341Q9BYN7 854 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
UBC-211ENST00000542416 CENPFP49454 3210 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
UBC-211ENST00000542416 EXOSC9Q06265 439 aaKnown RBP11.26□□□□□ -0.61
UBC-211ENST00000542416 CHAF1AQ13111 956 aaPredicted RBP11.26□□□□□ -0.61
UBC-211ENST00000542416 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 C17orf99Q6UX52 265 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 ANKRD23Q86SG2 305 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 SH3TC2Q8TF17 1288 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 DPF3Q92784 378 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 SRRDQ9UH36 339 aa11.26□□□□□ -0.61
UBC-211ENST00000542416 PDE8BO95263 885 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 IFIT1P09914 478 aaKnown RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 PSMC4P43686 418 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 UBXN2AP68543 259 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 APOBEC3HQ6NTF7 200 aaKnown RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 NR2E3Q9Y5X4 410 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
UBC-211ENST00000542416 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
UBC-211ENST00000542416 PDHXO00330 501 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 GJB1P08034 283 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 GRK4P32298 578 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 PARK7Q99497 189 aaKnown RBP11.24□□□□□ -0.61
UBC-211ENST00000542416 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 UTYO14607 1347 aa11.24□□□□□ -0.61
UBC-211ENST00000542416 BRCA2P51587 3418 aa11.23□□□□□ -0.61
UBC-211ENST00000542416 CEP290O15078 2479 aa11.23□□□□□ -0.61
UBC-211ENST00000542416 GJA8P48165 433 aa11.23□□□□□ -0.61
UBC-211ENST00000542416 CACNB3P54284 484 aa11.23□□□□□ -0.61
UBC-211ENST00000542416 FCGRTP55899 365 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms