RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
SCG3-202ENST00000542355 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 CTNNA3Q9UI47 895 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
SCG3-202ENST00000542355 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
SCG3-202ENST00000542355 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
SCG3-202ENST00000542355 ZGPATQ8N5A5 531 aaKnown RBP13.12□□□□□ -0.31
SCG3-202ENST00000542355 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCG3-202ENST00000542355 TCEANC2Q96MN5 208 aa13.12□□□□□ -0.31
SCG3-202ENST00000542355 POLLQ9UGP5 575 aa13.12□□□□□ -0.31
SCG3-202ENST00000542355 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 MBD4O95243 580 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 CYP7A1P22680 504 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 TBC1D16Q8TBP0 767 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 RAD21O60216 631 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 HAND2P61296 217 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
SCG3-202ENST00000542355 OLFM4Q6UX06 510 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 STOX1Q6ZVD7 989 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 ZNF804AQ7Z570 1209 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 C2CD5Q86YS7 1000 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
SCG3-202ENST00000542355 CUL4AQ13619 759 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
SCG3-202ENST00000542355 ADGRA1Q86SQ6 560 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
SCG3-202ENST00000542355 E7EWF7 191 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 H0YIN7 160 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 ZNF213O14771 459 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 LCORLQ8N3X6 602 aa13.1□□□□□ -0.31
SCG3-202ENST00000542355 TDRD7Q8NHU6 1098 aaKnown RBP13.1□□□□□ -0.31
SCG3-202ENST00000542355 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
SCG3-202ENST00000542355 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
SCG3-202ENST00000542355 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
SCG3-202ENST00000542355 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
SCG3-202ENST00000542355 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
SCG3-202ENST00000542355 CWC22Q9HCG8 908 aaKnown RBP13.09□□□□□ -0.31
SCG3-202ENST00000542355 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
SCG3-202ENST00000542355 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
SCG3-202ENST00000542355 PRKAB2O43741 272 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 PRDX5P30044 214 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 CHRNA5P30532 468 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 MECOMQ03112 1051 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 ZNF384Q8TF68 577 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 SLC4A4Q9Y6R1 1079 aa13.08□□□□□ -0.31
SCG3-202ENST00000542355 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
SCG3-202ENST00000542355 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
SCG3-202ENST00000542355 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
SCG3-202ENST00000542355 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
SCG3-202ENST00000542355 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
SCG3-202ENST00000542355 MPNDQ8N594 471 aa13.08□□□□□ -0.32
SCG3-202ENST00000542355 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
SCG3-202ENST00000542355 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
SCG3-202ENST00000542355 MAGEB6P1A0A0J9YX57 407 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 LARGE1O95461 756 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 GNAT2P19087 354 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 DHX32Q7L7V1 743 aaKnown RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 LRRC2Q9BYS8 371 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 TPCN1Q9ULQ1 816 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 GSG1L2A8MUP6 293 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 FGD1P98174 961 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 ME3Q16798 604 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 SPTY2D1Q68D10 685 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 STYK1Q6J9G0 422 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 Q6ZUG5 572 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 RNF25Q96BH1 459 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 NAPBQ9H115 298 aa13.07□□□□□ -0.32
SCG3-202ENST00000542355 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
SCG3-202ENST00000542355 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
SCG3-202ENST00000542355 IL1R1P14778 569 aa13.06□□□□□ -0.32
SCG3-202ENST00000542355 DYNLL1P63167 89 aaKnown RBP13.06□□□□□ -0.32
SCG3-202ENST00000542355 ALX1Q15699 326 aa13.06□□□□□ -0.32
SCG3-202ENST00000542355 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
SCG3-202ENST00000542355 RIOK1Q9BRS2 568 aaKnown RBP13.06□□□□□ -0.32
SCG3-202ENST00000542355 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
SCG3-202ENST00000542355 ZC3H12CQ9C0D7 883 aaKnown RBP13.06□□□□□ -0.32
SCG3-202ENST00000542355 MYO5AQ9Y4I1 1855 aaKnown RBP13.06□□□□□ -0.32
SCG3-202ENST00000542355 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
SCG3-202ENST00000542355 ILDR1Q86SU0 546 aaPredicted RBP13.05□□□□□ -0.32
SCG3-202ENST00000542355 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
SCG3-202ENST00000542355 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 SH2B1Q9NRF2 756 aaPredicted RBP13.05□□□□□ -0.32
SCG3-202ENST00000542355 TDO2P48775 406 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 EXOSC10Q01780 885 aaKnown RBP13.05□□□□□ -0.32
SCG3-202ENST00000542355 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 NECAB1Q8N987 351 aa13.05□□□□□ -0.32
SCG3-202ENST00000542355 CNKSR1Q969H4 720 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms