RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SPRYD7Q5W111 196 aa19.51■□□□□ 0.71
VPS33A-206ENST00000542310 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
VPS33A-206ENST00000542310 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
VPS33A-206ENST00000542310 ZNF70Q9UC06 446 aaPredicted RBP19.51■□□□□ 0.71
VPS33A-206ENST00000542310 ZBTB22O15209 634 aa19.5■□□□□ 0.71
VPS33A-206ENST00000542310 IREB2P48200 963 aaKnown RBP19.5■□□□□ 0.71
VPS33A-206ENST00000542310 BCAMP50895 628 aa19.5■□□□□ 0.71
VPS33A-206ENST00000542310 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
VPS33A-206ENST00000542310 PRKG1Q13976 671 aa19.5■□□□□ 0.71
VPS33A-206ENST00000542310 INTS3Q68E01 1043 aaKnown RBP19.5■□□□□ 0.71
VPS33A-206ENST00000542310 TEKT1Q969V4 418 aa19.5■□□□□ 0.71
VPS33A-206ENST00000542310 MRIQ9BWK5 157 aa19.5■□□□□ 0.71
VPS33A-206ENST00000542310 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
VPS33A-206ENST00000542310 LRRFIP2Q9Y608 721 aaKnown RBP19.5■□□□□ 0.71
VPS33A-206ENST00000542310 TNNI2P48788 182 aa19.49■□□□□ 0.71
VPS33A-206ENST00000542310 NBPF12Q5TAG4 269 aaPredicted RBP19.49■□□□□ 0.71
VPS33A-206ENST00000542310 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
VPS33A-206ENST00000542310 RPAP1Q9BWH6 1393 aaPredicted RBP19.48■□□□□ 0.71
VPS33A-206ENST00000542310 MANSC4A6NHS7 340 aaPredicted RBP19.48■□□□□ 0.71
VPS33A-206ENST00000542310 GNAI3P08754 354 aa19.48■□□□□ 0.71
VPS33A-206ENST00000542310 IL15P40933 162 aaPredicted RBP19.48■□□□□ 0.71
VPS33A-206ENST00000542310 WDR66Q8TBY9 1149 aa19.48■□□□□ 0.71
VPS33A-206ENST00000542310 ZDHHC15Q96MV8 337 aa19.48■□□□□ 0.71
VPS33A-206ENST00000542310 MEIS3Q99687 375 aa19.48■□□□□ 0.71
VPS33A-206ENST00000542310 COPRSQ9NQ92 184 aa19.48■□□□□ 0.71
VPS33A-206ENST00000542310 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
VPS33A-206ENST00000542310 ALDH1A1P00352 501 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 INHBEP58166 350 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 GRIK5Q16478 980 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 ATP2B3Q16720 1220 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 ANKRD13AQ8IZ07 590 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 SLC10A4Q96EP9 437 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 WNK4Q96J92 1243 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 CEP126Q9P2H0 1117 aa19.47■□□□□ 0.71
VPS33A-206ENST00000542310 CCDC85CA6NKD9 419 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 MKRN3Q13064 507 aaKnown RBP19.46■□□□□ 0.71
VPS33A-206ENST00000542310 MTX1Q13505 466 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 FKBP1CQ5VVH2 108 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 CTU1Q7Z7A3 348 aaKnown RBP19.46■□□□□ 0.71
VPS33A-206ENST00000542310 TEPSINQ96N21 525 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 SIL1Q9H173 461 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 FZD1Q9UP38 647 aa19.46■□□□□ 0.71
VPS33A-206ENST00000542310 SEMA3EO15041 775 aa19.45■□□□□ 0.7
VPS33A-206ENST00000542310 USP2O75604 605 aaPredicted RBP19.45■□□□□ 0.7
VPS33A-206ENST00000542310 HHIPL2Q6UWX4 724 aa19.45■□□□□ 0.7
VPS33A-206ENST00000542310 CLMNQ96JQ2 1002 aa19.45■□□□□ 0.7
VPS33A-206ENST00000542310 GNL3LQ9NVN8 582 aaKnown RBP19.45■□□□□ 0.7
VPS33A-206ENST00000542310 TMOD2Q9NZR1 351 aa19.45■□□□□ 0.7
VPS33A-206ENST00000542310 SALL1Q9NSC2 1324 aa19.45■□□□□ 0.7
VPS33A-206ENST00000542310 TCP10L2B9ZVM9 353 aa19.44■□□□□ 0.7
VPS33A-206ENST00000542310 TRIM27P14373 513 aa19.44■□□□□ 0.7
VPS33A-206ENST00000542310 ATF7IPQ6VMQ6 1270 aa19.44■□□□□ 0.7
VPS33A-206ENST00000542310 FAM83AQ86UY5 434 aa19.44■□□□□ 0.7
VPS33A-206ENST00000542310 RGS19P49795 217 aa19.43■□□□□ 0.7
VPS33A-206ENST00000542310 PKN2Q16513 984 aaKnown RBP19.43■□□□□ 0.7
VPS33A-206ENST00000542310 ZNF296Q8WUU4 475 aaPredicted RBP19.43■□□□□ 0.7
VPS33A-206ENST00000542310 HOOK2Q96ED9 719 aa19.43■□□□□ 0.7
VPS33A-206ENST00000542310 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
VPS33A-206ENST00000542310 PDS5AQ29RF7 1337 aaKnown RBP19.43■□□□□ 0.7
VPS33A-206ENST00000542310 MYH2Q9UKX2 1941 aa19.43■□□□□ 0.7
VPS33A-206ENST00000542310 GPR25O00155 361 aa19.42■□□□□ 0.7
VPS33A-206ENST00000542310 TBC1D8O95759 1140 aa19.42■□□□□ 0.7
VPS33A-206ENST00000542310 APOBEC3HQ6NTF7 200 aaKnown RBP19.42■□□□□ 0.7
VPS33A-206ENST00000542310 IFNL1Q8IU54 200 aa19.42■□□□□ 0.7
VPS33A-206ENST00000542310 DENND2AQ9ULE3 1009 aa19.42■□□□□ 0.7
VPS33A-206ENST00000542310 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
VPS33A-206ENST00000542310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.7
VPS33A-206ENST00000542310 DOCK2Q92608 1830 aa19.41■□□□□ 0.7
VPS33A-206ENST00000542310 TESPA1A2RU30 521 aaPredicted RBP19.4■□□□□ 0.7
VPS33A-206ENST00000542310 SRGAP3O43295 1099 aa19.4■□□□□ 0.7
VPS33A-206ENST00000542310 GJA5P36382 358 aa19.4■□□□□ 0.7
VPS33A-206ENST00000542310 CDAN1Q8IWY9 1227 aa19.4■□□□□ 0.7
VPS33A-206ENST00000542310 ZGPATQ8N5A5 531 aaKnown RBP19.4■□□□□ 0.7
VPS33A-206ENST00000542310 BCAR3O75815 825 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 PHKA1P46020 1223 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 OTUD7BQ6GQQ9 843 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 OPTNQ96CV9 577 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 AKAP2Q9Y2D5 859 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 CSADQ9Y600 493 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 AK9Q5TCS8 1911 aa19.39■□□□□ 0.69
VPS33A-206ENST00000542310 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 FKTNO75072 461 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 GNAI2P04899 355 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 LDHBP07195 334 aaKnown RBP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 PRDX5P30044 214 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 CACNB3P54284 484 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 MAP3K9P80192 1104 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 HNRNPUQ00839 825 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 VGLL4Q14135 290 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 DIEXFQ68CQ4 756 aaKnown RBP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 CCDC102BQ68D86 513 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 FRAT1Q92837 279 aaPredicted RBP19.38■□□□□ 0.69
VPS33A-206ENST00000542310 ELP3Q9H9T3 547 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 DAGLAQ9Y4D2 1042 aa19.38■□□□□ 0.69
VPS33A-206ENST00000542310 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
VPS33A-206ENST00000542310 DCAF15Q66K64 600 aa19.37■□□□□ 0.69
VPS33A-206ENST00000542310 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
VPS33A-206ENST00000542310 ADORA1P30542 326 aa19.36■□□□□ 0.69
VPS33A-206ENST00000542310 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms