RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TMEM39BQ9GZU3 492 aa24.96■■□□□ 1.59
DDX11-220ENST00000542244 SUPT20HL1Q3ZLR7 823 aa24.94■■□□□ 1.58
DDX11-220ENST00000542244 VPS37DQ86XT2 251 aa24.94■■□□□ 1.58
DDX11-220ENST00000542244 CNKSR2Q8WXI2 1034 aa24.94■■□□□ 1.58
DDX11-220ENST00000542244 EYA2O00167 538 aa24.93■■□□□ 1.58
DDX11-220ENST00000542244 PPP1R12BO60237 982 aaPredicted RBP24.93■■□□□ 1.58
DDX11-220ENST00000542244 SREBF2Q12772 1141 aa24.93■■□□□ 1.58
DDX11-220ENST00000542244 HPS5Q9UPZ3 1129 aa24.93■■□□□ 1.58
DDX11-220ENST00000542244 OTOFQ9HC10 1997 aa24.93■■□□□ 1.58
DDX11-220ENST00000542244 IFNL1Q8IU54 200 aa24.92■■□□□ 1.58
DDX11-220ENST00000542244 SIL1Q9H173 461 aa24.92■■□□□ 1.58
DDX11-220ENST00000542244 ELP3Q9H9T3 547 aa24.92■■□□□ 1.58
DDX11-220ENST00000542244 PUM3Q15397 648 aaKnown RBP24.91■■□□□ 1.58
DDX11-220ENST00000542244 CAVIN4Q5BKX8 364 aa24.91■■□□□ 1.58
DDX11-220ENST00000542244 PTPN18Q99952 460 aa24.91■■□□□ 1.58
DDX11-220ENST00000542244 FRAT2O75474 233 aaPredicted RBP24.9■■□□□ 1.58
DDX11-220ENST00000542244 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.9■■□□□ 1.58
DDX11-220ENST00000542244 CFHR5Q9BXR6 569 aa24.9■■□□□ 1.58
DDX11-220ENST00000542244 PA2G4Q9UQ80 394 aaKnown RBP24.9■■□□□ 1.58
DDX11-220ENST00000542244 TNNQ9UQP3 1299 aa24.9■■□□□ 1.58
DDX11-220ENST00000542244 MANSC4A6NHS7 340 aaPredicted RBP24.89■■□□□ 1.58
DDX11-220ENST00000542244 ZBTB48P10074 688 aaPredicted RBP24.89■■□□□ 1.58
DDX11-220ENST00000542244 IREB2P48200 963 aaKnown RBP24.89■■□□□ 1.58
DDX11-220ENST00000542244 CAP1Q01518 475 aa24.89■■□□□ 1.58
DDX11-220ENST00000542244 APOBEC3HQ6NTF7 200 aaKnown RBP24.89■■□□□ 1.58
DDX11-220ENST00000542244 LRRFIP2Q9Y608 721 aaKnown RBP24.89■■□□□ 1.58
DDX11-220ENST00000542244 FKTNO75072 461 aa24.88■■□□□ 1.57
DDX11-220ENST00000542244 ANKRD13AQ8IZ07 590 aa24.88■■□□□ 1.57
DDX11-220ENST00000542244 MEIS3Q99687 375 aa24.88■■□□□ 1.57
DDX11-220ENST00000542244 IFIT1P09914 478 aaKnown RBP24.87■■□□□ 1.57
DDX11-220ENST00000542244 UBTFL1P0CB47 393 aaPredicted RBP24.87■■□□□ 1.57
DDX11-220ENST00000542244 RARSP54136 660 aaKnown RBP24.87■■□□□ 1.57
DDX11-220ENST00000542244 NOM1Q5C9Z4 860 aaKnown RBP24.87■■□□□ 1.57
DDX11-220ENST00000542244 TNFAIP1Q13829 316 aa24.86■■□□□ 1.57
DDX11-220ENST00000542244 TBC1D22AQ8WUA7 517 aa24.86■■□□□ 1.57
DDX11-220ENST00000542244 TEKT1Q969V4 418 aa24.86■■□□□ 1.57
DDX11-220ENST00000542244 OPTNQ96CV9 577 aa24.86■■□□□ 1.57
DDX11-220ENST00000542244 ZDHHC15Q96MV8 337 aa24.86■■□□□ 1.57
DDX11-220ENST00000542244 TNRC18O15417 2968 aaPredicted RBP24.86■■□□□ 1.57
DDX11-220ENST00000542244 LAMB1P07942 1786 aa24.85■■□□□ 1.57
DDX11-220ENST00000542244 HDLBPQ00341 1268 aaKnown RBP24.85■■□□□ 1.57
DDX11-220ENST00000542244 VGLL4Q14135 290 aa24.85■■□□□ 1.57
DDX11-220ENST00000542244 LPIN2Q92539 896 aa24.85■■□□□ 1.57
DDX11-220ENST00000542244 MS4A4AQ96JQ5 239 aa24.85■■□□□ 1.57
DDX11-220ENST00000542244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.85■■□□□ 1.57
DDX11-220ENST00000542244 KIF16BQ96L93 1317 aa24.85■■□□□ 1.57
DDX11-220ENST00000542244 SLC5A1P13866 664 aa24.84■■□□□ 1.57
DDX11-220ENST00000542244 ADORA1P30542 326 aa24.84■■□□□ 1.57
DDX11-220ENST00000542244 CRHR2Q13324 411 aa24.84■■□□□ 1.57
DDX11-220ENST00000542244 DIXDC1Q155Q3 683 aa24.84■■□□□ 1.57
DDX11-220ENST00000542244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.84■■□□□ 1.57
DDX11-220ENST00000542244 TESPA1A2RU30 521 aaPredicted RBP24.83■■□□□ 1.57
DDX11-220ENST00000542244 UNCXA6NJT0 531 aa24.83■■□□□ 1.57
DDX11-220ENST00000542244 CCER2I3L3R5 266 aa24.83■■□□□ 1.57
DDX11-220ENST00000542244 INHBEP58166 350 aa24.83■■□□□ 1.57
DDX11-220ENST00000542244 PRDX5P30044 214 aa24.82■■□□□ 1.56
DDX11-220ENST00000542244 PHKA1P46020 1223 aa24.82■■□□□ 1.56
DDX11-220ENST00000542244 MAP3K9P80192 1104 aa24.82■■□□□ 1.56
DDX11-220ENST00000542244 ATP2B3Q16720 1220 aa24.82■■□□□ 1.56
DDX11-220ENST00000542244 BRI3BPQ8WY22 251 aa24.82■■□□□ 1.56
DDX11-220ENST00000542244 API5Q9BZZ5 524 aaKnown RBP24.82■■□□□ 1.56
DDX11-220ENST00000542244 CIAO1O76071 339 aa24.81■■□□□ 1.56
DDX11-220ENST00000542244 ALDH1A1P00352 501 aa24.81■■□□□ 1.56
DDX11-220ENST00000542244 CT47B1P0C2W7 299 aaPredicted RBP24.81■■□□□ 1.56
DDX11-220ENST00000542244 TNNI2P48788 182 aa24.81■■□□□ 1.56
DDX11-220ENST00000542244 MRIQ9BWK5 157 aa24.81■■□□□ 1.56
DDX11-220ENST00000542244 PKN2Q16513 984 aaKnown RBP24.8■■□□□ 1.56
DDX11-220ENST00000542244 FBXO46Q6PJ61 603 aaPredicted RBP24.8■■□□□ 1.56
DDX11-220ENST00000542244 HHIPL2Q6UWX4 724 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 CD99L2Q8TCZ2 262 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 ZKSCAN4Q969J2 545 aaPredicted RBP24.8■■□□□ 1.56
DDX11-220ENST00000542244 OTUD5Q96G74 571 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 CEP126Q9P2H0 1117 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 DAGLAQ9Y4D2 1042 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 SNCAIPQ9Y6H5 919 aa24.8■■□□□ 1.56
DDX11-220ENST00000542244 NFIAQ12857 509 aa24.79■■□□□ 1.56
DDX11-220ENST00000542244 OTOP1Q7RTM1 612 aa24.79■■□□□ 1.56
DDX11-220ENST00000542244 BCAR3O75815 825 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 CDC42EP5Q6NZY7 148 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 MIGA2Q7L4E1 593 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 ZFPM1Q8IX07 1006 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 FAM43AQ8N2R8 423 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 WDR66Q8TBY9 1149 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 COPRSQ9NQ92 184 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 SUGT1Q9Y2Z0 365 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 TRIM17Q9Y577 477 aa24.78■■□□□ 1.56
DDX11-220ENST00000542244 TIMM10P62072 90 aa24.77■■□□□ 1.56
DDX11-220ENST00000542244 INTS3Q68E01 1043 aaKnown RBP24.77■■□□□ 1.56
DDX11-220ENST00000542244 FAM83AQ86UY5 434 aa24.77■■□□□ 1.56
DDX11-220ENST00000542244 MYH13Q9UKX3 1938 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 CCL15-CCL14A0A0B4J2E2 113 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 TCP10Q12799 353 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 CCL15Q16663 113 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 WRNIP1Q96S55 665 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 HTTP42858 3142 aa24.76■■□□□ 1.55
DDX11-220ENST00000542244 SPDYE5A6NIY4 337 aa24.75■■□□□ 1.55
DDX11-220ENST00000542244 INPP5BP32019 993 aa24.75■■□□□ 1.55
DDX11-220ENST00000542244 IL15P40933 162 aaPredicted RBP24.75■■□□□ 1.55
DDX11-220ENST00000542244 FKBP1CQ5VVH2 108 aa24.75■■□□□ 1.55
DDX11-220ENST00000542244 CCDC102BQ68D86 513 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms