RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 SOX10P56693 466 aa18.72■□□□□ 0.59
ITM2C-208ENST00000541852 LRRC24Q50LG9 513 aa18.72■□□□□ 0.59
ITM2C-208ENST00000541852 CLMNQ96JQ2 1002 aa18.72■□□□□ 0.59
ITM2C-208ENST00000541852 USP44Q9H0E7 712 aa18.72■□□□□ 0.59
ITM2C-208ENST00000541852 MAST3O60307 1309 aa18.72■□□□□ 0.59
ITM2C-208ENST00000541852 PDE4DIPQ5VU43 2346 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 ARHGEF6Q15052 776 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 ANKRD44Q8N8A2 993 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 TEKT1Q969V4 418 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 ERO1AQ96HE7 468 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 FZD1Q9UP38 647 aa18.71■□□□□ 0.59
ITM2C-208ENST00000541852 CT47B1P0C2W7 299 aaPredicted RBP18.7■□□□□ 0.58
ITM2C-208ENST00000541852 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
ITM2C-208ENST00000541852 PUM3Q15397 648 aaKnown RBP18.7■□□□□ 0.58
ITM2C-208ENST00000541852 FKBP1CQ5VVH2 108 aa18.7■□□□□ 0.58
ITM2C-208ENST00000541852 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
ITM2C-208ENST00000541852 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
ITM2C-208ENST00000541852 TMOD2Q9NZR1 351 aa18.7■□□□□ 0.58
ITM2C-208ENST00000541852 SSC5DA1L4H1 1573 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 TCP10L2B9ZVM9 353 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 TNRC18O15417 2968 aaPredicted RBP18.69■□□□□ 0.58
ITM2C-208ENST00000541852 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
ITM2C-208ENST00000541852 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
ITM2C-208ENST00000541852 FAM83AQ86UY5 434 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 ZDHHC15Q96MV8 337 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 TEPSINQ96N21 525 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 R3HDMLQ9H3Y0 253 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
ITM2C-208ENST00000541852 CSADQ9Y600 493 aa18.69■□□□□ 0.58
ITM2C-208ENST00000541852 EYA2O00167 538 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 IGF2BP3O00425 579 aaKnown RBP eCLIP18.68■□□□□ 0.58
ITM2C-208ENST00000541852 SLC34A2O95436 690 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 BCAMP50895 628 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 GTF2A2P52657 109 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 HHIPL2Q6UWX4 724 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 WDR66Q8TBY9 1149 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 LPIN2Q92539 896 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
ITM2C-208ENST00000541852 SLC5A1P13866 664 aa18.67■□□□□ 0.58
ITM2C-208ENST00000541852 FGFR2P21802 821 aa18.67■□□□□ 0.58
ITM2C-208ENST00000541852 IQSEC3Q9UPP2 1182 aaPredicted RBP18.67■□□□□ 0.58
ITM2C-208ENST00000541852 TRIM17Q9Y577 477 aa18.67■□□□□ 0.58
ITM2C-208ENST00000541852 AOX1Q06278 1338 aa18.67■□□□□ 0.58
ITM2C-208ENST00000541852 SP3Q02447 781 aa18.66■□□□□ 0.58
ITM2C-208ENST00000541852 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.66■□□□□ 0.58
ITM2C-208ENST00000541852 TMEM39BQ9GZU3 492 aa18.66■□□□□ 0.58
ITM2C-208ENST00000541852 ELP3Q9H9T3 547 aa18.66■□□□□ 0.58
ITM2C-208ENST00000541852 GNL3LQ9NVN8 582 aaKnown RBP18.66■□□□□ 0.58
ITM2C-208ENST00000541852 GJA5P36382 358 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 CRHR2Q13324 411 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 DCAF15Q66K64 600 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
ITM2C-208ENST00000541852 MS4A4AQ96JQ5 239 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 PTPN18Q99952 460 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 ZFYVE28Q9HCC9 887 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 LAMB1P07942 1786 aa18.65■□□□□ 0.58
ITM2C-208ENST00000541852 CIAO1O76071 339 aa18.64■□□□□ 0.57
ITM2C-208ENST00000541852 UBTFL1P0CB47 393 aaPredicted RBP18.64■□□□□ 0.57
ITM2C-208ENST00000541852 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.57
ITM2C-208ENST00000541852 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
ITM2C-208ENST00000541852 EFCC1Q9HA90 598 aa18.64■□□□□ 0.57
ITM2C-208ENST00000541852 ZCCHC17Q9NP64 241 aaKnown RBP18.64■□□□□ 0.57
ITM2C-208ENST00000541852 CEP126Q9P2H0 1117 aa18.64■□□□□ 0.57
ITM2C-208ENST00000541852 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
ITM2C-208ENST00000541852 VGLL4Q14135 290 aa18.63■□□□□ 0.57
ITM2C-208ENST00000541852 GRIK5Q16478 980 aa18.63■□□□□ 0.57
ITM2C-208ENST00000541852 APOBEC3HQ6NTF7 200 aaKnown RBP18.63■□□□□ 0.57
ITM2C-208ENST00000541852 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
ITM2C-208ENST00000541852 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
ITM2C-208ENST00000541852 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
ITM2C-208ENST00000541852 ZBTB22O15209 634 aa18.62■□□□□ 0.57
ITM2C-208ENST00000541852 CETPP11597 493 aa18.62■□□□□ 0.57
ITM2C-208ENST00000541852 PRPF38BQ5VTL8 546 aaKnown RBP18.62■□□□□ 0.57
ITM2C-208ENST00000541852 PTPN22Q9Y2R2 807 aa18.62■□□□□ 0.57
ITM2C-208ENST00000541852 CCL15-CCL14A0A0B4J2E2 113 aa18.61■□□□□ 0.57
ITM2C-208ENST00000541852 SPDYE5A6NIY4 337 aa18.61■□□□□ 0.57
ITM2C-208ENST00000541852 SEMA3EO15041 775 aa18.61■□□□□ 0.57
ITM2C-208ENST00000541852 CCL15Q16663 113 aa18.61■□□□□ 0.57
ITM2C-208ENST00000541852 IL15P40933 162 aaPredicted RBP18.6■□□□□ 0.57
ITM2C-208ENST00000541852 TAF1CQ15572 869 aaPredicted RBP18.6■□□□□ 0.57
ITM2C-208ENST00000541852 ATG9AQ7Z3C6 839 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 NBPF11Q86T75 865 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 CD99L2Q8TCZ2 262 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 FAM151AQ8WW52 585 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 BRI3BPQ8WY22 251 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 WRNIP1Q96S55 665 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 ZNF341Q9BYN7 854 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 DENND2AQ9ULE3 1009 aa18.6■□□□□ 0.57
ITM2C-208ENST00000541852 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
ITM2C-208ENST00000541852 ZGPATQ8N5A5 531 aaKnown RBP18.59■□□□□ 0.57
ITM2C-208ENST00000541852 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
ITM2C-208ENST00000541852 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
ITM2C-208ENST00000541852 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
ITM2C-208ENST00000541852 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms