RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 EPB41L2O43491 1005 aaKnown RBP33.42■■■□□ 2.94
CCM2-218ENST00000541586 GPC2Q8N158 579 aa33.42■■■□□ 2.94
CCM2-218ENST00000541586 ZC3H4Q9UPT8 1303 aaKnown RBP33.41■■■□□ 2.94
CCM2-218ENST00000541586 CHGBP05060 677 aa33.41■■■□□ 2.94
CCM2-218ENST00000541586 TBC1D22AQ8WUA7 517 aa33.41■■■□□ 2.94
CCM2-218ENST00000541586 LSG1Q9H089 658 aaKnown RBP33.41■■■□□ 2.94
CCM2-218ENST00000541586 CYP2E1P05181 493 aaPredicted RBP33.4■■■□□ 2.94
CCM2-218ENST00000541586 KIAA1211Q6ZU35 1233 aa33.4■■■□□ 2.94
CCM2-218ENST00000541586 CERS5Q8N5B7 392 aa33.4■■■□□ 2.94
CCM2-218ENST00000541586 GLTPD2A6NH11 291 aa33.39■■■□□ 2.94
CCM2-218ENST00000541586 KIAA0825Q8IV33 1275 aa33.39■■■□□ 2.94
CCM2-218ENST00000541586 MYH13Q9UKX3 1938 aa33.38■■■□□ 2.93
CCM2-218ENST00000541586 GMPSP49915 693 aaPredicted RBP33.38■■■□□ 2.93
CCM2-218ENST00000541586 GRIK5Q16478 980 aa33.38■■■□□ 2.93
CCM2-218ENST00000541586 ZNF526Q8TF50 670 aaPredicted RBP33.36■■■□□ 2.93
CCM2-218ENST00000541586 LRP2BPQ9P2M1 347 aa33.36■■■□□ 2.93
CCM2-218ENST00000541586 PDS5AQ29RF7 1337 aaKnown RBP33.36■■■□□ 2.93
CCM2-218ENST00000541586 ZBTB22O15209 634 aa33.36■■■□□ 2.93
CCM2-218ENST00000541586 MCCP23508 829 aa33.36■■■□□ 2.93
CCM2-218ENST00000541586 PRDX5P30044 214 aa33.36■■■□□ 2.93
CCM2-218ENST00000541586 ZGPATQ8N5A5 531 aaKnown RBP33.36■■■□□ 2.93
CCM2-218ENST00000541586 AGBL3Q8NEM8 1001 aa33.36■■■□□ 2.93
CCM2-218ENST00000541586 RNF113AO15541 343 aaKnown RBP33.35■■■□□ 2.93
CCM2-218ENST00000541586 LDHBP07195 334 aaKnown RBP33.35■■■□□ 2.93
CCM2-218ENST00000541586 TTF1Q15361 905 aaPredicted RBP33.35■■■□□ 2.93
CCM2-218ENST00000541586 MYO3BQ8WXR4 1341 aa33.34■■■□□ 2.93
CCM2-218ENST00000541586 FKBP1AP62942 108 aaKnown RBP33.34■■■□□ 2.93
CCM2-218ENST00000541586 PTH1RQ03431 593 aa33.34■■■□□ 2.93
CCM2-218ENST00000541586 LRRFIP1Q32MZ4 808 aaKnown RBP33.34■■■□□ 2.93
CCM2-218ENST00000541586 ERICH6Q7L0X2 663 aa33.34■■■□□ 2.93
CCM2-218ENST00000541586 ZNF589Q86UQ0 364 aaPredicted RBP33.34■■■□□ 2.93
CCM2-218ENST00000541586 PIH1D3Q9NQM4 214 aaKnown RBP33.34■■■□□ 2.93
CCM2-218ENST00000541586 SLFNL1Q499Z3 407 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 RAI14Q9P0K7 980 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 TTF2Q9UNY4 1162 aaKnown RBP33.33■■■□□ 2.93
CCM2-218ENST00000541586 CCDC171Q6TFL3 1326 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 SALL1Q9NSC2 1324 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 IDH1O75874 414 aaKnown RBP33.33■■■□□ 2.93
CCM2-218ENST00000541586 MCMDC2Q4G0Z9 681 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 ZMYM1Q5SVZ6 1142 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 SEC62Q99442 399 aaKnown RBP33.33■■■□□ 2.93
CCM2-218ENST00000541586 GMLQ99445 158 aa33.33■■■□□ 2.93
CCM2-218ENST00000541586 CNOT7Q9UIV1 285 aaKnown RBP33.33■■■□□ 2.93
CCM2-218ENST00000541586 SHTN1A0MZ66 631 aa33.32■■■□□ 2.92
CCM2-218ENST00000541586 RPS12P25398 132 aaKnown RBP33.32■■■□□ 2.92
CCM2-218ENST00000541586 SCNN1DP51172 638 aa33.32■■■□□ 2.92
CCM2-218ENST00000541586 SPTY2D1Q68D10 685 aaPredicted RBP33.32■■■□□ 2.92
CCM2-218ENST00000541586 HELLSQ9NRZ9 838 aa33.32■■■□□ 2.92
CCM2-218ENST00000541586 HSPA4P34932 840 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 OGFOD1Q8N543 542 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 ZFYP08048 801 aaPredicted RBP33.31■■■□□ 2.92
CCM2-218ENST00000541586 USP17L8P0C7I0 530 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 MICALL2Q8IY33 904 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 DPF2Q92785 391 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 PALD1Q9ULE6 856 aa33.31■■■□□ 2.92
CCM2-218ENST00000541586 BECN1Q14457 450 aa33.3■■■□□ 2.92
CCM2-218ENST00000541586 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.3■■■□□ 2.92
CCM2-218ENST00000541586 PSME4Q14997 1843 aa33.3■■■□□ 2.92
CCM2-218ENST00000541586 LMOD1P29536 600 aaPredicted RBP33.29■■■□□ 2.92
CCM2-218ENST00000541586 SLC4A3P48751 1232 aa33.29■■■□□ 2.92
CCM2-218ENST00000541586 DZIP1Q86YF9 867 aaKnown RBP33.29■■■□□ 2.92
CCM2-218ENST00000541586 EPS15P42566 896 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 ANAPC15P60006 121 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 CCDC129Q6ZRS4 1044 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 GPRC5DQ9NZD1 345 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 HDAC9Q9UKV0 1011 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 SUGT1Q9Y2Z0 365 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 RABEP1Q15276 862 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 RBM26Q5T8P6 1007 aaKnown RBP33.28■■■□□ 2.92
CCM2-218ENST00000541586 MAP4K1Q92918 833 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 TBC1D2Q9BYX2 928 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 MYH7P12883 1935 aa33.28■■■□□ 2.92
CCM2-218ENST00000541586 H7C1D1 291 aa33.27■■■□□ 2.92
CCM2-218ENST00000541586 RBM5P52756 815 aaKnown RBP eCLIP33.27■■■□□ 2.92
CCM2-218ENST00000541586 DAXXQ9UER7 740 aaPredicted RBP33.27■■■□□ 2.92
CCM2-218ENST00000541586 YY1P25490 414 aa33.26■■■□□ 2.92
CCM2-218ENST00000541586 MECOMQ03112 1051 aa33.26■■■□□ 2.92
CCM2-218ENST00000541586 MAP3K12Q12852 859 aa33.26■■■□□ 2.92
CCM2-218ENST00000541586 ZSCAN25Q6NSZ9 544 aa33.26■■■□□ 2.92
CCM2-218ENST00000541586 MYO5AQ9Y4I1 1855 aaKnown RBP33.26■■■□□ 2.91
CCM2-218ENST00000541586 DIXDC1Q155Q3 683 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 OSBP2Q969R2 916 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 IL17RAQ96F46 866 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 RRAGCQ9HB90 399 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 MAST3O60307 1309 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 ZNF646O15015 1829 aaPredicted RBP33.25■■■□□ 2.91
CCM2-218ENST00000541586 ADD2P35612 726 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 SLC9C2Q5TAH2 1124 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 SAMD7Q7Z3H4 446 aa33.25■■■□□ 2.91
CCM2-218ENST00000541586 L3MBTL3Q96JM7 780 aaPredicted RBP33.25■■■□□ 2.91
CCM2-218ENST00000541586 DOCK2Q92608 1830 aa33.24■■■□□ 2.91
CCM2-218ENST00000541586 APPBP2Q92624 585 aa33.24■■■□□ 2.91
CCM2-218ENST00000541586 NSUN4Q96CB9 384 aaKnown RBP33.24■■■□□ 2.91
CCM2-218ENST00000541586 RBM8AQ9Y5S9 174 aaKnown RBP33.24■■■□□ 2.91
CCM2-218ENST00000541586 M0R2C6 588 aa33.23■■■□□ 2.91
CCM2-218ENST00000541586 MAGEB6Q8N7X4 407 aa33.23■■■□□ 2.91
CCM2-218ENST00000541586 SNX21Q969T3 373 aa33.23■■■□□ 2.91
CCM2-218ENST00000541586 HACL1Q9UJ83 578 aa33.23■■■□□ 2.91
CCM2-218ENST00000541586 TBC1D10BQ4KMP7 808 aaPredicted RBP33.22■■■□□ 2.91
CCM2-218ENST00000541586 NAA16Q6N069 864 aaPredicted RBP33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms