RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 DIP2CQ9Y2E4 1556 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 PPP1R12BO60237 982 aaPredicted RBP6.92□□□□□ -1.3
DDB1-219ENST00000541513 ASMTLO95671 621 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 NEK2P51955 445 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 ICE2Q659A1 982 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 PAF1Q8N7H5 531 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 TEX19Q8NA77 164 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 NINJ1Q92982 152 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 CDH19Q9H159 772 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 ZHX3Q9H4I2 956 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 KIAA1468Q9P260 1216 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 INTUQ9ULD6 942 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 ABCC5O15440 1437 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 DAPK1P53355 1430 aa6.92□□□□□ -1.3
DDB1-219ENST00000541513 A0A087X0B3 334 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 NPHP1O15259 732 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 ANP32CO43423 234 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 AKAP10O43572 662 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 PCSK2P16519 638 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 RAB27AP51159 221 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 NFKB2Q00653 900 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 PUS10Q3MIT2 529 aaKnown RBP6.91□□□□□ -1.3
DDB1-219ENST00000541513 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 SPICE1Q8N0Z3 855 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 AFAP1Q8N556 730 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 ZNF296Q8WUU4 475 aaPredicted RBP6.91□□□□□ -1.3
DDB1-219ENST00000541513 CCDC74AQ96AQ1 378 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 ZNF669Q96BR6 464 aaPredicted RBP6.91□□□□□ -1.3
DDB1-219ENST00000541513 THAP11Q96EK4 314 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 SLC4A9Q96Q91 983 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
DDB1-219ENST00000541513 SPAG9O60271 1321 aaKnown RBP6.91□□□□□ -1.3
DDB1-219ENST00000541513 C9orf84Q5VXU9 1444 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 ADGRL2O95490 1459 aa6.91□□□□□ -1.3
DDB1-219ENST00000541513 GOLGA8CPA6NN73 597 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 ITGBL1O95965 494 aaPredicted RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 RPLP1P05386 114 aaKnown RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 NEFMP07197 916 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 LDHCP07864 332 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 CALRP27797 417 aaKnown RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 PDE6BP35913 854 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 ZAP70P43403 619 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 TRAPPC10P48553 1259 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 PURAQ00577 322 aaKnown RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 ERFEQ4G0M1 354 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 C1orf53Q5VUE5 145 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 PI16Q6UXB8 463 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 RINLQ6ZS11 566 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 RNF180Q86T96 592 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 ETFBKMTQ8IXQ9 262 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 PDILTQ8N807 584 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 C1orf131Q8NDD1 294 aaKnown RBP6.9□□□□□ -1.3
DDB1-219ENST00000541513 MYRIPQ8NFW9 859 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 CXorf38Q8TB03 319 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
DDB1-219ENST00000541513 YEATS2Q9ULM3 1422 aa6.9□□□□□ -1.31
DDB1-219ENST00000541513 ATP10AO60312 1499 aa6.9□□□□□ -1.31
DDB1-219ENST00000541513 BCORL1Q5H9F3 1711 aa6.9□□□□□ -1.31
DDB1-219ENST00000541513 GREM1O60565 184 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 TSPY4P0CV99 314 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 TSPY10P0CW01 314 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 HTR3AP46098 478 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 GDF10P55107 478 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 PSMA6P60900 246 aaKnown RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 PIN1Q13526 163 aaPredicted RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 GRIN2CQ14957 1233 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 MTERF2Q49AM1 385 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 L1TD1Q5T7N2 865 aaKnown RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 FAM102BQ5T8I3 360 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 ERAP2Q6P179 960 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 KSR2Q6VAB6 950 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 DGKHQ86XP1 1220 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 AFAP1L2Q8N4X5 818 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 ANKRD24Q8TF21 1146 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 RHOVQ96L33 236 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 TAGLN3Q9UI15 199 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 KLF15Q9UIH9 416 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
DDB1-219ENST00000541513 PPP2R3BQ9Y5P8 575 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 CLSPNQ9HAW4 1339 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 AGLP35573 1532 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 SIGLEC1Q9BZZ2 1709 aa6.89□□□□□ -1.31
DDB1-219ENST00000541513 EIF2AK4Q9P2K8 1649 aaKnown RBP6.88□□□□□ -1.31
DDB1-219ENST00000541513 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
DDB1-219ENST00000541513 RFPL3O75679 317 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms