RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 SURF6O75683 361 aaKnown RBP6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 IGHDP01880 384 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 TAF7LQ5H9L4 462 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 PRPF40BQ6NWY9 871 aaKnown RBP6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 Q6ZNB5 142 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 ATG9AQ7Z3C6 839 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 ERC1Q8IUD2 1116 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 SP8Q8IXZ3 490 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 TTLL6Q8N841 843 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 VGLL2Q8N8G2 317 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 SYT17Q9BSW7 474 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 FHDC1Q9C0D6 1143 aaPredicted RBP6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 PIM2Q9P1W9 311 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 MINPP1Q9UNW1 487 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 PA2G4Q9UQ80 394 aaKnown RBP6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 ATP6V0A2Q9Y487 856 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 MROH5Q6ZUA9 1318 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 KDM2BQ8NHM5 1336 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 LRP5O75197 1615 aa6.17□□□□□ -1.42
SPARCL1-209ENST00000541496 N4BP2Q86UW6 1770 aaPredicted RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 A0A0G2JLW4 131 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 PPEF1O14829 653 aaPredicted RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 KDM4AO75164 1064 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 G3BP1Q13283 466 aaKnown RBP eCLIP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 LRRC24Q50LG9 513 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 CENPQQ7L2Z9 268 aaPredicted RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 KLHDC4Q8TBB5 520 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 ZNF622Q969S3 477 aaKnown RBP eCLIP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 KIF1BPQ96EK5 621 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 ZNF594Q96JF6 807 aaPredicted RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 PUS3Q9BZE2 481 aaKnown RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 ANKRD2Q9GZV1 360 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 GPR108Q9NPR9 543 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 PODXL2Q9NZ53 605 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 CEP126Q9P2H0 1117 aa6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 PPP1R1BQ9UD71 204 aaPredicted RBP6.16□□□□□ -1.42
SPARCL1-209ENST00000541496 SASH1O94885 1247 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 PDE8BO95263 885 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 FGFR2P21802 821 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 NUCB1Q02818 461 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 CHRNDQ07001 517 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 FUT2Q10981 343 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 DIXDC1Q155Q3 683 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 DALRD3Q5D0E6 543 aaKnown RBP6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 MORN1Q5T089 497 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 C15orf52Q6ZUT6 534 aaKnown RBP6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 NLGN2Q8NFZ4 835 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 RHPN1Q8TCX5 695 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 ZNF516Q92618 1163 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 CCDC136Q96JN2 1154 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 RTFDC1Q9BY42 306 aaPredicted RBP6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 LRRCC1Q9C099 1032 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 SIL1Q9H173 461 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 TMX4Q9H1E5 349 aaPredicted RBP6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 EXOC6BQ9Y2D4 811 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 AKAP2Q9Y2D5 859 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 LEMD3Q9Y2U8 911 aa6.15□□□□□ -1.42
SPARCL1-209ENST00000541496 XDHP47989 1333 aa6.15□□□□□ -1.43
SPARCL1-209ENST00000541496 ANKRD36CQ5JPF3 1778 aa6.15□□□□□ -1.43
SPARCL1-209ENST00000541496 SNED1Q8TER0 1413 aa6.15□□□□□ -1.43
SPARCL1-209ENST00000541496 TNRC6CQ9HCJ0 1690 aaKnown RBP6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 NUP98P52948 1817 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 ATP2B4P23634 1241 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 SSTR3P32745 418 aaPredicted RBP6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 TFCP2Q12800 502 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 OS9Q13438 667 aaPredicted RBP6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 UBE4AQ14139 1066 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 PUM3Q15397 648 aaKnown RBP6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 Q3C1V9 767 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 CCDC93Q567U6 631 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 METTL24Q5JXM2 366 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 RTKN2Q8IZC4 609 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 CLASRPQ8N2M8 674 aaKnown RBP6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 LPIN2Q92539 896 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 PSMD1Q99460 953 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 VPS33BQ9H267 617 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 SLC24A3Q9HC58 644 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 LTBP3Q9NS15 1303 aa6.14□□□□□ -1.43
SPARCL1-209ENST00000541496 C21orf2O43822 256 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 FMNL1O95466 1100 aaPredicted RBP6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 ADH1BP00325 375 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 GPSM2P81274 684 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 PDE4DQ08499 809 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 ATP2B3Q16720 1220 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 TNNI3KQ59H18 835 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 B4GALNT3Q6L9W6 998 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 PPP1R18Q6NYC8 613 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 CHD1LQ86WJ1 897 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 PARP9Q8IXQ6 854 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 MPNDQ8N594 471 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 SUPT20HQ8NEM7 779 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 EAF2Q96CJ1 260 aaPredicted RBP6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 PRKD2Q9BZL6 878 aa6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.13□□□□□ -1.43
SPARCL1-209ENST00000541496 ANKIB1Q9P2G1 1089 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms