RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 A0A1W2PP55 124 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 GPR182O15218 404 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 ARL4DP49703 201 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 C19orf57Q0VDD7 668 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 COL19A1Q14993 1142 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 CLEC10AQ8IUN9 316 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 USP26Q9BXU7 913 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 LIN7BQ9HAP6 207 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 NPHS2Q9NP85 383 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 PIM2Q9P1W9 311 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 CCDC39Q9UFE4 941 aa7.56□□□□□ -1.2
PRKDC-210ENST00000541488 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
PRKDC-210ENST00000541488 MSMPQ1L6U9 139 aa7.55□□□□□ -1.2
PRKDC-210ENST00000541488 SPRED3Q2MJR0 410 aa7.55□□□□□ -1.2
PRKDC-210ENST00000541488 GALNT12Q8IXK2 581 aa7.55□□□□□ -1.2
PRKDC-210ENST00000541488 FAM20CQ8IXL6 584 aa7.55□□□□□ -1.2
PRKDC-210ENST00000541488 GRIA4P48058 902 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 GSTM4Q03013 218 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 PDE3BQ13370 1112 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 RUSC1Q9BVN2 902 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 BHLHE41Q9C0J9 482 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-210ENST00000541488 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
PRKDC-210ENST00000541488 A0A096LPE4 126 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 A0A1W2PPZ6 126 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 SART1O43290 800 aaKnown RBP7.53□□□□□ -1.2
PRKDC-210ENST00000541488 CPNE3O75131 537 aaKnown RBP7.53□□□□□ -1.2
PRKDC-210ENST00000541488 BEND4Q6ZU67 534 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 WNT8BQ93098 351 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 FBXL18Q96ME1 805 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 EHD4Q9H223 541 aa7.53□□□□□ -1.2
PRKDC-210ENST00000541488 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
PRKDC-210ENST00000541488 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.21
PRKDC-210ENST00000541488 MFSD14AQ96MC6 490 aa7.52□□□□□ -1.21
PRKDC-210ENST00000541488 TCF12Q99081 682 aa7.52□□□□□ -1.21
PRKDC-210ENST00000541488 KCNF1Q9H3M0 494 aa7.52□□□□□ -1.21
PRKDC-210ENST00000541488 GADD45BO75293 160 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-210ENST00000541488 BRD1O95696 1058 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 PRNPP04156 253 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 NEFLP07196 543 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 BMP3P12645 472 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 PREPP48147 710 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 FDX2Q6P4F2 183 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 VSIG10LQ86VR7 867 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
PRKDC-210ENST00000541488 DLGAP3O95886 979 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 ZNF865P0CJ78 1059 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-210ENST00000541488 MAPK1P28482 360 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 PCDH1Q08174 1060 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 ZNF423Q2M1K9 1284 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 TMC7Q7Z402 723 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 CCDC74AQ96AQ1 378 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 RNF208Q9H0X6 261 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
PRKDC-210ENST00000541488 LOC100289279A0A1B0GTE1 492 aa7.49□□□□□ -1.21
PRKDC-210ENST00000541488 PAPLNO95428 1278 aa7.49□□□□□ -1.21
PRKDC-210ENST00000541488 IGHA2P01877 340 aa7.49□□□□□ -1.21
PRKDC-210ENST00000541488 ZNF157P51786 506 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-210ENST00000541488 PI16Q6UXB8 463 aa7.49□□□□□ -1.21
PRKDC-210ENST00000541488 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-210ENST00000541488 C12orf50Q8NA57 414 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-210ENST00000541488 EPS8L3Q8TE67 593 aaKnown RBP7.49□□□□□ -1.21
PRKDC-210ENST00000541488 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
PRKDC-210ENST00000541488 GAS2O43903 313 aaKnown RBP7.48□□□□□ -1.21
PRKDC-210ENST00000541488 FOSL1P15407 271 aa7.48□□□□□ -1.21
PRKDC-210ENST00000541488 KIAA0319Q5VV43 1072 aa7.48□□□□□ -1.21
PRKDC-210ENST00000541488 NUTM2GQ5VZR2 741 aa7.48□□□□□ -1.21
PRKDC-210ENST00000541488 CITED4Q96RK1 184 aa7.48□□□□□ -1.21
PRKDC-210ENST00000541488 CSRNP1Q96S65 589 aa7.48□□□□□ -1.21
PRKDC-210ENST00000541488 CLEC4MQ9H2X3 399 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-210ENST00000541488 ECEL1O95672 775 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 CTSBP07858 339 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 DRD2P14416 443 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 ANKRD34AQ69YU3 496 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 DMRTB1Q96MA1 342 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 RBCK1Q9BYM8 510 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
PRKDC-210ENST00000541488 GNEQ9Y223 722 aaKnown RBP7.47□□□□□ -1.21
PRKDC-210ENST00000541488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
PRKDC-210ENST00000541488 MAOBP27338 520 aa7.46□□□□□ -1.22
PRKDC-210ENST00000541488 RXRBP28702 533 aa7.46□□□□□ -1.22
PRKDC-210ENST00000541488 SGO2Q562F6 1265 aa7.46□□□□□ -1.22
PRKDC-210ENST00000541488 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
PRKDC-210ENST00000541488 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
PRKDC-210ENST00000541488 F13BP05160 661 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 GRM2Q14416 872 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 FBXL6Q8N531 539 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 TMPRSS13Q9BYE2 586 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 SOX17Q9H6I2 414 aaPredicted RBP7.45□□□□□ -1.22
PRKDC-210ENST00000541488 ABCB6Q9NP58 842 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 NCANO14594 1321 aa7.45□□□□□ -1.22
PRKDC-210ENST00000541488 PNMA6FA0A0J9YX94 578 aa7.44□□□□□ -1.22
PRKDC-210ENST00000541488 POU4F3Q15319 338 aa7.44□□□□□ -1.22
PRKDC-210ENST00000541488 PKN1Q16512 942 aa7.44□□□□□ -1.22
PRKDC-210ENST00000541488 GIMAP7Q8NHV1 300 aa7.44□□□□□ -1.22
PRKDC-210ENST00000541488 ZC3H12CQ9C0D7 883 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms