RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 GGCXP38435 758 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 MRE11P49959 708 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 CTSWP56202 376 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 SLC4A9Q96Q91 983 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 DNAJC2Q99543 621 aaKnown RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 ZBTB1Q9Y2K1 713 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 KAT6BQ8WYB5 2073 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 ANKRD18BA2A2Z9 1011 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 PDE8AO60658 829 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 S1PR4O95977 384 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 MBD3O95983 291 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 IFIT1P09914 478 aaKnown RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 MCTP1Q6DN14 999 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 ZNF512BQ96KM6 892 aaPredicted RBP12.09□□□□□ -0.47
LMO3-224ENST00000540848 ZDHHC9Q9Y397 364 aa12.09□□□□□ -0.47
LMO3-224ENST00000540848 LRP5O75197 1615 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 LRRC24Q50LG9 513 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 FAM89AQ96GI7 184 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 LMBRD1Q9NUN5 540 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
LMO3-224ENST00000540848 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
LMO3-224ENST00000540848 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
LMO3-224ENST00000540848 PDCP20941 246 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 RPS6KB1P23443 525 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 ZNF589Q86UQ0 364 aaPredicted RBP12.07□□□□□ -0.48
LMO3-224ENST00000540848 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 RIPOR2Q9Y4F9 1068 aa12.07□□□□□ -0.48
LMO3-224ENST00000540848 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
LMO3-224ENST00000540848 ITGA6P23229 1130 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 SIK1P57059 783 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 TIMM10P62072 90 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 PKP1Q13835 747 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 LAPTM4AQ15012 233 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 HLFQ16534 295 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 ADCK5Q3MIX3 580 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
LMO3-224ENST00000540848 ARXQ96QS3 562 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 LAMB2P55268 1798 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 RIC1Q4ADV7 1423 aa12.06□□□□□ -0.48
LMO3-224ENST00000540848 GOLIM4O00461 696 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 NR1I2O75469 434 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 ADH1BP00325 375 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 TTF1Q15361 905 aaPredicted RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 ZSCAN25Q6NSZ9 544 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 NOL8Q76FK4 1167 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 DDX46Q7L014 1031 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 MARCH10Q8NA82 808 aaPredicted RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 XAGE2Q96GT9 111 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 PUS3Q9BZE2 481 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 GZF1Q9H116 711 aaPredicted RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 STX6O43752 255 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 NCLP19338 710 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 GPTP24298 496 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 ZNF445P59923 1031 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 VPS72Q15906 364 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 ATP2B3Q16720 1220 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 METTL24Q5JXM2 366 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 SYAP1Q96A49 352 aaPredicted RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
LMO3-224ENST00000540848 NEK1Q96PY6 1258 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
LMO3-224ENST00000540848 CNNM1Q9NRU3 951 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
LMO3-224ENST00000540848 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
LMO3-224ENST00000540848 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
LMO3-224ENST00000540848 NRG2O14511 850 aaPredicted RBP12.04□□□□□ -0.48
LMO3-224ENST00000540848 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
LMO3-224ENST00000540848 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
LMO3-224ENST00000540848 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
LMO3-224ENST00000540848 UTP14AQ9BVJ6 771 aaKnown RBP12.04□□□□□ -0.48
LMO3-224ENST00000540848 MYH7P12883 1935 aa12.04□□□□□ -0.48
LMO3-224ENST00000540848 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms