RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TMEM39BQ9GZU3 492 aa18.11■□□□□ 0.49
MSRB3-209ENST00000540804 IFIT1P09914 478 aaKnown RBP18.1■□□□□ 0.49
MSRB3-209ENST00000540804 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
MSRB3-209ENST00000540804 GJA5P36382 358 aa18.1■□□□□ 0.49
MSRB3-209ENST00000540804 ZNF296Q8WUU4 475 aaPredicted RBP18.1■□□□□ 0.49
MSRB3-209ENST00000540804 TEPSINQ96N21 525 aa18.1■□□□□ 0.49
MSRB3-209ENST00000540804 API5Q9BZZ5 524 aaKnown RBP18.1■□□□□ 0.49
MSRB3-209ENST00000540804 PPP1R12BO60237 982 aaPredicted RBP18.09■□□□□ 0.49
MSRB3-209ENST00000540804 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
MSRB3-209ENST00000540804 WNK4Q96J92 1243 aa18.09■□□□□ 0.49
MSRB3-209ENST00000540804 BCAR3O75815 825 aa18.08■□□□□ 0.48
MSRB3-209ENST00000540804 SLC5A1P13866 664 aa18.08■□□□□ 0.48
MSRB3-209ENST00000540804 LPIN2Q92539 896 aa18.08■□□□□ 0.48
MSRB3-209ENST00000540804 SREBF2Q12772 1141 aa18.07■□□□□ 0.48
MSRB3-209ENST00000540804 MIER1Q8N108 512 aa18.07■□□□□ 0.48
MSRB3-209ENST00000540804 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
MSRB3-209ENST00000540804 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
MSRB3-209ENST00000540804 ELP3Q9H9T3 547 aa18.07■□□□□ 0.48
MSRB3-209ENST00000540804 ARAP2Q8WZ64 1704 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 GPR25O00155 361 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 IGF2BP3O00425 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
MSRB3-209ENST00000540804 ADORA1P30542 326 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 IREB2P48200 963 aaKnown RBP18.06■□□□□ 0.48
MSRB3-209ENST00000540804 ATP2B3Q16720 1220 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 APOBEC3HQ6NTF7 200 aaKnown RBP18.06■□□□□ 0.48
MSRB3-209ENST00000540804 CTU1Q7Z7A3 348 aaKnown RBP18.06■□□□□ 0.48
MSRB3-209ENST00000540804 TEKT1Q969V4 418 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 ECM29Q5VYK3 1845 aa18.06■□□□□ 0.48
MSRB3-209ENST00000540804 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 CIAO1O76071 339 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 PHKA1P46020 1223 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 TNFAIP1Q13829 316 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 INTS3Q68E01 1043 aaKnown RBP18.05■□□□□ 0.48
MSRB3-209ENST00000540804 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
MSRB3-209ENST00000540804 CEP126Q9P2H0 1117 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.05■□□□□ 0.48
MSRB3-209ENST00000540804 AKAP11Q9UKA4 1901 aa18.05■□□□□ 0.48
MSRB3-209ENST00000540804 MANSC4A6NHS7 340 aaPredicted RBP18.04■□□□□ 0.48
MSRB3-209ENST00000540804 HDLBPQ00341 1268 aaKnown RBP18.04■□□□□ 0.48
MSRB3-209ENST00000540804 DIXDC1Q155Q3 683 aa18.04■□□□□ 0.48
MSRB3-209ENST00000540804 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.04■□□□□ 0.48
MSRB3-209ENST00000540804 IFNL1Q8IU54 200 aa18.04■□□□□ 0.48
MSRB3-209ENST00000540804 ANKRD13AQ8IZ07 590 aa18.04■□□□□ 0.48
MSRB3-209ENST00000540804 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
MSRB3-209ENST00000540804 ZDHHC15Q96MV8 337 aa18.04■□□□□ 0.48
MSRB3-209ENST00000540804 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
MSRB3-209ENST00000540804 TRIM27P14373 513 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 PRDX5P30044 214 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 RGS19P49795 217 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 SOX10P56693 466 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 ARHGAP45Q92619 1136 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 OPTNQ96CV9 577 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 PTPN18Q99952 460 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
MSRB3-209ENST00000540804 IL15P40933 162 aaPredicted RBP18.02■□□□□ 0.48
MSRB3-209ENST00000540804 TNNI2P48788 182 aa18.02■□□□□ 0.48
MSRB3-209ENST00000540804 TIMM10P62072 90 aa18.02■□□□□ 0.48
MSRB3-209ENST00000540804 VGLL4Q14135 290 aa18.02■□□□□ 0.48
MSRB3-209ENST00000540804 SRGAP3O43295 1099 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 MLLT1Q03111 559 aaPredicted RBP18.01■□□□□ 0.47
MSRB3-209ENST00000540804 TFCP2Q12800 502 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 HHIPL2Q6UWX4 724 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.01■□□□□ 0.47
MSRB3-209ENST00000540804 WDR66Q8TBY9 1149 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 CFHR5Q9BXR6 569 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 DAGLAQ9Y4D2 1042 aa18.01■□□□□ 0.47
MSRB3-209ENST00000540804 FKTNO75072 461 aa18■□□□□ 0.47
MSRB3-209ENST00000540804 MAP3K9P80192 1104 aa18■□□□□ 0.47
MSRB3-209ENST00000540804 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
MSRB3-209ENST00000540804 CCDC102BQ68D86 513 aa18■□□□□ 0.47
MSRB3-209ENST00000540804 SUGT1Q9Y2Z0 365 aa18■□□□□ 0.47
MSRB3-209ENST00000540804 MAST3O60307 1309 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 OTOFQ9HC10 1997 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 UNCXA6NJT0 531 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 GNAI3P08754 354 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 INHBEP58166 350 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 TCP10Q12799 353 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 NFIAQ12857 509 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 CDC42EP5Q6NZY7 148 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 MIGA2Q7L4E1 593 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 ZKSCAN4Q969J2 545 aaPredicted RBP17.99■□□□□ 0.47
MSRB3-209ENST00000540804 MS4A4AQ96JQ5 239 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 TMOD2Q9NZR1 351 aa17.99■□□□□ 0.47
MSRB3-209ENST00000540804 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 ALDH1A1P00352 501 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 CAP1Q01518 475 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 CRHR2Q13324 411 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
MSRB3-209ENST00000540804 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 BRI3BPQ8WY22 251 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 OTUD5Q96G74 571 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 SNCAIPQ9Y6H5 919 aa17.98■□□□□ 0.47
MSRB3-209ENST00000540804 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
MSRB3-209ENST00000540804 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
MSRB3-209ENST00000540804 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
MSRB3-209ENST00000540804 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms