RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 TTC22Q5TAA0 569 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 AACSQ86V21 672 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 TBC1D22AQ8WUA7 517 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
ATL3-204ENST00000540699 ADARB2Q9NS39 739 aaKnown RBP12.92□□□□□ -0.34
ATL3-204ENST00000540699 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
ATL3-204ENST00000540699 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
ATL3-204ENST00000540699 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
ATL3-204ENST00000540699 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
ATL3-204ENST00000540699 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 RASSF10A6NK89 507 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 MX1P20591 662 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 MICALL2Q8IY33 904 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 WDR66Q8TBY9 1149 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
ATL3-204ENST00000540699 MYH2Q9UKX2 1941 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
ATL3-204ENST00000540699 H7C1D1 291 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
ATL3-204ENST00000540699 MCAMP43121 646 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 SCARF1Q14162 830 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 USP50Q70EL3 339 aaPredicted RBP12.9□□□□□ -0.34
ATL3-204ENST00000540699 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
ATL3-204ENST00000540699 CHAF1AQ13111 956 aaPredicted RBP12.89□□□□□ -0.35
ATL3-204ENST00000540699 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 MTMR14Q8NCE2 650 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 MYH7P12883 1935 aa12.89□□□□□ -0.35
ATL3-204ENST00000540699 EGFRP00533 1210 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
ATL3-204ENST00000540699 LBX1P52954 281 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
ATL3-204ENST00000540699 HDLBPQ00341 1268 aaKnown RBP12.88□□□□□ -0.35
ATL3-204ENST00000540699 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATL3-204ENST00000540699 GRIK5Q16478 980 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATL3-204ENST00000540699 ZBED3Q96IU2 234 aaPredicted RBP12.88□□□□□ -0.35
ATL3-204ENST00000540699 MRIQ9BWK5 157 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 MYOZ2Q9NPC6 264 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
ATL3-204ENST00000540699 IGSF3O75054 1194 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
ATL3-204ENST00000540699 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 PI16Q6UXB8 463 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
ATL3-204ENST00000540699 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
ATL3-204ENST00000540699 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 HDAC9Q9UKV0 1011 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 ABT1Q9ULW3 272 aaKnown RBP12.87□□□□□ -0.35
ATL3-204ENST00000540699 MAST3O60307 1309 aa12.87□□□□□ -0.35
ATL3-204ENST00000540699 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
ATL3-204ENST00000540699 TRAF5O00463 557 aa12.86□□□□□ -0.35
ATL3-204ENST00000540699 SEC24BO95487 1268 aa12.86□□□□□ -0.35
ATL3-204ENST00000540699 ATP5JP18859 108 aa12.86□□□□□ -0.35
ATL3-204ENST00000540699 SDSP20132 328 aa12.86□□□□□ -0.35
ATL3-204ENST00000540699 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
ATL3-204ENST00000540699 BCL11AQ9H165 835 aa12.86□□□□□ -0.35
ATL3-204ENST00000540699 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
ATL3-204ENST00000540699 CYP2E1P05181 493 aaPredicted RBP12.85□□□□□ -0.35
ATL3-204ENST00000540699 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
ATL3-204ENST00000540699 HSPA8P11142 646 aaKnown RBP12.85□□□□□ -0.35
ATL3-204ENST00000540699 PRDX5P30044 214 aa12.85□□□□□ -0.35
ATL3-204ENST00000540699 CST9Q5W186 159 aa12.85□□□□□ -0.35
ATL3-204ENST00000540699 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
ATL3-204ENST00000540699 ABHD8Q96I13 439 aa12.85□□□□□ -0.35
ATL3-204ENST00000540699 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
ATL3-204ENST00000540699 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
ATL3-204ENST00000540699 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
ATL3-204ENST00000540699 WNT10BO00744 389 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 CDC45O75419 566 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 ZAP70P43403 619 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 CRKP46108 304 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 CFAP100Q494V2 611 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 HHIPL2Q6UWX4 724 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
ATL3-204ENST00000540699 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms