RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 CTAGE5O15320 804 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 ZNF500O60304 480 aaPredicted RBP11.42□□□□□ -0.58
PHC1-208ENST00000540574 MCAMP43121 646 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 NGLY1Q96IV0 654 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 NOL10Q9BSC4 688 aaKnown RBP11.42□□□□□ -0.58
PHC1-208ENST00000540574 VAT1LQ9HCJ6 419 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
PHC1-208ENST00000540574 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
PHC1-208ENST00000540574 CTSWP56202 376 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 RTN1Q16799 776 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 ZNF827Q17R98 1081 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 KRT40Q6A162 431 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
PHC1-208ENST00000540574 ZNF202O95125 648 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 PDE6AP16499 860 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 GOLGA8FQ08AF8 430 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 GOLGA8DPQ0D2H9 430 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 RESTQ13127 1097 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
PHC1-208ENST00000540574 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
PHC1-208ENST00000540574 ANO1Q5XXA6 986 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 PLIN2Q99541 437 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 DYNC1I1O14576 645 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 URI1O94763 535 aaPredicted RBP11.41□□□□□ -0.58
PHC1-208ENST00000540574 UBASH3AP57075 661 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 C1orf167Q5SNV9 1468 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 MYSM1Q5VVJ2 828 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 CEP135Q66GS9 1140 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 BAZ2BQ9UIF8 2168 aaKnown RBP11.41□□□□□ -0.58
PHC1-208ENST00000540574 PDE8AO60658 829 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 COBLO75128 1261 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 DHX58Q96C10 678 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 PIH1D3Q9NQM4 214 aaKnown RBP11.41□□□□□ -0.58
PHC1-208ENST00000540574 ZHX1Q9UKY1 873 aaPredicted RBP11.41□□□□□ -0.58
PHC1-208ENST00000540574 STX8Q9UNK0 236 aa11.41□□□□□ -0.58
PHC1-208ENST00000540574 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 UQCRFS1P1P0C7P4 283 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 TOP1P11387 765 aaKnown RBP11.4□□□□□ -0.58
PHC1-208ENST00000540574 USP5P45974 858 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 PNOCQ13519 176 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 GIGYF2Q6Y7W6 1299 aaKnown RBP11.4□□□□□ -0.58
PHC1-208ENST00000540574 NLRP10Q86W26 655 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
PHC1-208ENST00000540574 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 TTLL11Q8NHH1 800 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 C8orf37Q96NL8 207 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 ZMYND15Q9H091 742 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 NRXN3Q9Y4C0 1643 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 TSPY2A6NKD2 308 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 BTBD18B2RXH4 712 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 IQCA1Q86XH1 822 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 GOLPH3LQ9H4A5 285 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 UBE2Q2LH0YL09 131 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 AP5Z1O43299 807 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 PDE8BO95263 885 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 DPCR1Q3MIW9 517 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 DZIP1Q86YF9 867 aaKnown RBP11.4□□□□□ -0.58
PHC1-208ENST00000540574 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
PHC1-208ENST00000540574 CACTINQ8WUQ7 758 aaKnown RBP11.4□□□□□ -0.58
PHC1-208ENST00000540574 C3P01024 1663 aa11.4□□□□□ -0.59
PHC1-208ENST00000540574 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
PHC1-208ENST00000540574 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 DIS3L2Q8IYB7 885 aaKnown RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 MAP7D2Q96T17 732 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 MEGF6O75095 1541 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 SMTNL1A8MU46 457 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 ZPR1O75312 459 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 NAA16Q6N069 864 aaPredicted RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 AMOTL1Q8IY63 956 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 LLPHQ9BRT6 129 aaKnown RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 MAP3K15Q6ZN16 1313 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 NLRP5P59047 1200 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 NAA30Q147X3 362 aaPredicted RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 NBPF5PQ86XG9 351 aaPredicted RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 FBXO18Q8NFZ0 1043 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 CARD10Q9BWT7 1032 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 ATG3Q9NT62 314 aa11.39□□□□□ -0.59
PHC1-208ENST00000540574 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PHC1-208ENST00000540574 POLR2DO15514 142 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 PFKFB1P16118 471 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 IFIT1BQ5T764 474 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 UIMC1Q96RL1 719 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.38□□□□□ -0.59
PHC1-208ENST00000540574 VPS54Q9P1Q0 977 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
PHC1-208ENST00000540574 U2AF2P26368 475 aaKnown RBP eCLIP11.38□□□□□ -0.597e-6■■□□□ 14.4
PHC1-208ENST00000540574 ZNF174Q15697 407 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms