RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 AOX1Q06278 1338 aa20.91■□□□□ 0.94
PSMD3-204ENST00000540504 MKRN3Q13064 507 aaKnown RBP20.91■□□□□ 0.94
PSMD3-204ENST00000540504 NBPF12Q5TAG4 269 aaPredicted RBP20.91■□□□□ 0.94
PSMD3-204ENST00000540504 TDRD3Q9H7E2 651 aaKnown RBP20.91■□□□□ 0.94
PSMD3-204ENST00000540504 LAMB1P07942 1786 aa20.9■□□□□ 0.94
PSMD3-204ENST00000540504 TBC1D8O95759 1140 aa20.9■□□□□ 0.94
PSMD3-204ENST00000540504 CHAF1AQ13111 956 aaPredicted RBP20.9■□□□□ 0.94
PSMD3-204ENST00000540504 MRIQ9BWK5 157 aa20.9■□□□□ 0.94
PSMD3-204ENST00000540504 NOB1Q9ULX3 412 aaKnown RBP20.9■□□□□ 0.94
PSMD3-204ENST00000540504 FZD1Q9UP38 647 aa20.9■□□□□ 0.94
PSMD3-204ENST00000540504 IQSEC3Q9UPP2 1182 aaPredicted RBP20.9■□□□□ 0.94
PSMD3-204ENST00000540504 SUGT1Q9Y2Z0 365 aa20.9■□□□□ 0.94
PSMD3-204ENST00000540504 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
PSMD3-204ENST00000540504 TNNI2P48788 182 aa20.89■□□□□ 0.93
PSMD3-204ENST00000540504 BCAMP50895 628 aa20.89■□□□□ 0.93
PSMD3-204ENST00000540504 PKN2Q16513 984 aaKnown RBP20.89■□□□□ 0.93
PSMD3-204ENST00000540504 ANKRD13AQ8IZ07 590 aa20.89■□□□□ 0.93
PSMD3-204ENST00000540504 LPIN2Q92539 896 aa20.89■□□□□ 0.93
PSMD3-204ENST00000540504 MAST3O60307 1309 aa20.88■□□□□ 0.93
PSMD3-204ENST00000540504 GPR25O00155 361 aa20.88■□□□□ 0.93
PSMD3-204ENST00000540504 SLC5A1P13866 664 aa20.88■□□□□ 0.93
PSMD3-204ENST00000540504 MLLT1Q03111 559 aaPredicted RBP20.88■□□□□ 0.93
PSMD3-204ENST00000540504 ZNF296Q8WUU4 475 aaPredicted RBP20.88■□□□□ 0.93
PSMD3-204ENST00000540504 TEKT1Q969V4 418 aa20.88■□□□□ 0.93
PSMD3-204ENST00000540504 WNK4Q96J92 1243 aa20.88■□□□□ 0.93
PSMD3-204ENST00000540504 CIAO1O76071 339 aa20.87■□□□□ 0.93
PSMD3-204ENST00000540504 GRIK5Q16478 980 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 ATG9AQ7Z3C6 839 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 ARHGAP45Q92619 1136 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 CLMNQ96JQ2 1002 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 ZDHHC15Q96MV8 337 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 TEPSINQ96N21 525 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 MYH13Q9UKX3 1938 aa20.86■□□□□ 0.93
PSMD3-204ENST00000540504 TCP10L2B9ZVM9 353 aa20.85■□□□□ 0.93
PSMD3-204ENST00000540504 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
PSMD3-204ENST00000540504 IFNL1Q8IU54 200 aa20.85■□□□□ 0.93
PSMD3-204ENST00000540504 WDR66Q8TBY9 1149 aa20.85■□□□□ 0.93
PSMD3-204ENST00000540504 FKBP1CQ5VVH2 108 aa20.84■□□□□ 0.93
PSMD3-204ENST00000540504 HHIPL2Q6UWX4 724 aa20.84■□□□□ 0.93
PSMD3-204ENST00000540504 TMOD2Q9NZR1 351 aa20.84■□□□□ 0.93
PSMD3-204ENST00000540504 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
PSMD3-204ENST00000540504 FKTNO75072 461 aa20.83■□□□□ 0.93
PSMD3-204ENST00000540504 IL15P40933 162 aaPredicted RBP20.83■□□□□ 0.93
PSMD3-204ENST00000540504 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
PSMD3-204ENST00000540504 FAM83AQ86UY5 434 aa20.83■□□□□ 0.93
PSMD3-204ENST00000540504 TMEM39BQ9GZU3 492 aa20.83■□□□□ 0.93
PSMD3-204ENST00000540504 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.93
PSMD3-204ENST00000540504 LRRFIP2Q9Y608 721 aaKnown RBP20.83■□□□□ 0.93
PSMD3-204ENST00000540504 OTOFQ9HC10 1997 aa20.83■□□□□ 0.92
PSMD3-204ENST00000540504 ATP2B3Q16720 1220 aa20.82■□□□□ 0.92
PSMD3-204ENST00000540504 INTS3Q68E01 1043 aaKnown RBP20.82■□□□□ 0.92
PSMD3-204ENST00000540504 HOOK2Q96ED9 719 aa20.82■□□□□ 0.92
PSMD3-204ENST00000540504 SIL1Q9H173 461 aa20.82■□□□□ 0.92
PSMD3-204ENST00000540504 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
PSMD3-204ENST00000540504 ZBTB22O15209 634 aa20.81■□□□□ 0.92
PSMD3-204ENST00000540504 GNAI3P08754 354 aa20.81■□□□□ 0.92
PSMD3-204ENST00000540504 MAP3K9P80192 1104 aa20.81■□□□□ 0.92
PSMD3-204ENST00000540504 APOBEC3HQ6NTF7 200 aaKnown RBP20.81■□□□□ 0.92
PSMD3-204ENST00000540504 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
PSMD3-204ENST00000540504 TESPA1A2RU30 521 aaPredicted RBP20.8■□□□□ 0.92
PSMD3-204ENST00000540504 IGF2BP3O00425 579 aaKnown RBP eCLIP20.8■□□□□ 0.92
PSMD3-204ENST00000540504 SEMA3EO15041 775 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
PSMD3-204ENST00000540504 GJA5P36382 358 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 OPTNQ96CV9 577 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 MEIS3Q99687 375 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 R3HDMLQ9H3Y0 253 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 HPS5Q9UPZ3 1129 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 CSADQ9Y600 493 aa20.8■□□□□ 0.92
PSMD3-204ENST00000540504 FBXO46Q6PJ61 603 aaPredicted RBP20.79■□□□□ 0.92
PSMD3-204ENST00000540504 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.79■□□□□ 0.92
PSMD3-204ENST00000540504 CDAN1Q8IWY9 1227 aa20.79■□□□□ 0.92
PSMD3-204ENST00000540504 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.79■□□□□ 0.921e-15■■□□□ 13
PSMD3-204ENST00000540504 ELP3Q9H9T3 547 aa20.79■□□□□ 0.92
PSMD3-204ENST00000540504 RPAP1Q9BWH6 1393 aaPredicted RBP20.78■□□□□ 0.92
PSMD3-204ENST00000540504 CACNB3P54284 484 aa20.78■□□□□ 0.92
PSMD3-204ENST00000540504 DENND2AQ9ULE3 1009 aa20.78■□□□□ 0.92
PSMD3-204ENST00000540504 SALL1Q9NSC2 1324 aa20.78■□□□□ 0.92
PSMD3-204ENST00000540504 MTX1Q13505 466 aa20.77■□□□□ 0.92
PSMD3-204ENST00000540504 VGLL4Q14135 290 aa20.77■□□□□ 0.92
PSMD3-204ENST00000540504 PA2G4Q9UQ80 394 aaKnown RBP20.77■□□□□ 0.92
PSMD3-204ENST00000540504 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
PSMD3-204ENST00000540504 DCAF15Q66K64 600 aa20.76■□□□□ 0.91
PSMD3-204ENST00000540504 MS4A4AQ96JQ5 239 aa20.76■□□□□ 0.91
PSMD3-204ENST00000540504 GTF2A2P52657 109 aa20.75■□□□□ 0.91
PSMD3-204ENST00000540504 ZGPATQ8N5A5 531 aaKnown RBP20.75■□□□□ 0.91
PSMD3-204ENST00000540504 PTPN18Q99952 460 aa20.75■□□□□ 0.91
PSMD3-204ENST00000540504 SPDYE5A6NIY4 337 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 PRDX5P30044 214 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 PHKA1P46020 1223 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 SOX10P56693 466 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 CRHR2Q13324 411 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 ATF7IPQ6VMQ6 1270 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 FAM151AQ8WW52 585 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 ERO1AQ96HE7 468 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 AKAP2Q9Y2D5 859 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 DAGLAQ9Y4D2 1042 aa20.74■□□□□ 0.91
PSMD3-204ENST00000540504 TRIM27P14373 513 aa20.73■□□□□ 0.91
PSMD3-204ENST00000540504 CCDC102BQ68D86 513 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms