RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ANGEL1Q9UNK9 670 aaKnown RBP14.28□□□□□ -0.12
TMEM258-205ENST00000540434 PA2G4Q9UQ80 394 aaKnown RBP14.28□□□□□ -0.12
TMEM258-205ENST00000540434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.28□□□□□ -0.12
TMEM258-205ENST00000540434 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
TMEM258-205ENST00000540434 USP17L3A6NCW0 530 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 USP17L4A6NCW7 530 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 G3V3G9 751 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 SLC9C1Q4G0N8 1177 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 DCAF8Q5TAQ9 597 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 USP17L1Q7RTZ2 530 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.13
TMEM258-205ENST00000540434 ZNF804BA4D1E1 1349 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 MANSC4A6NHS7 340 aaPredicted RBP14.26□□□□□ -0.13
TMEM258-205ENST00000540434 WNT10BO00744 389 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 SP3Q02447 781 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 ARMC9Q7Z3E5 817 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 VGLL2Q8N8G2 317 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 CNNM1Q9NRU3 951 aa14.26□□□□□ -0.13
TMEM258-205ENST00000540434 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 SASH1O94885 1247 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 NF2P35240 595 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 PODNQ7Z5L7 613 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 SHISA4Q96DD7 197 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 PTPN18Q99952 460 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 ANKRD2Q9GZV1 360 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 SIL1Q9H173 461 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 LEMD3Q9Y2U8 911 aa14.25□□□□□ -0.13
TMEM258-205ENST00000540434 GNAI3P08754 354 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 GJA5P36382 358 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 INHBEP58166 350 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 ITPRIPQ8IWB1 547 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 WNK4Q96J92 1243 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
TMEM258-205ENST00000540434 MED23Q9ULK4 1368 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 ZSWIM8A7E2V4 1837 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 EYA2O00167 538 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 ECM2O94769 699 aaPredicted RBP14.23□□□□□ -0.13
TMEM258-205ENST00000540434 GNAI2P04899 355 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 MTX1Q13505 466 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 Q7L0L9 218 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
TMEM258-205ENST00000540434 FTSJ3Q8IY81 847 aaKnown RBP14.23□□□□□ -0.13
TMEM258-205ENST00000540434 MTFR1Q15390 333 aa14.22□□□□□ -0.13
TMEM258-205ENST00000540434 ZBED3Q96IU2 234 aaPredicted RBP14.22□□□□□ -0.13
TMEM258-205ENST00000540434 ECM29Q5VYK3 1845 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 SRGAP3O43295 1099 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 FGFR2P21802 821 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 GYG1P46976 350 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 MAP3K11Q16584 847 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 C15orf52Q6ZUT6 534 aaKnown RBP14.21□□□□□ -0.13
TMEM258-205ENST00000540434 FAM84BQ96KN1 310 aaPredicted RBP14.21□□□□□ -0.13
TMEM258-205ENST00000540434 ARHGAP39Q9C0H5 1083 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 CD209Q9NNX6 404 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 COPRSQ9NQ92 184 aa14.21□□□□□ -0.13
TMEM258-205ENST00000540434 PDE8BO95263 885 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 ZBTB48P10074 688 aaPredicted RBP14.2□□□□□ -0.14
TMEM258-205ENST00000540434 KCNJ4P48050 445 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 MVPQ14764 893 aaKnown RBP14.2□□□□□ -0.14
TMEM258-205ENST00000540434 METTL24Q5JXM2 366 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 FBXW7Q969H0 707 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 SSC5DA1L4H1 1573 aa14.2□□□□□ -0.14
TMEM258-205ENST00000540434 MROH5Q6ZUA9 1318 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 UBE4AQ14139 1066 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 POLA2Q14181 598 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
TMEM258-205ENST00000540434 SIRT2Q8IXJ6 389 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 OGFOD1Q8N543 542 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 CERS5Q8N5B7 392 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 ZBTB40Q9NUA8 1239 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 STAP2Q9UGK3 403 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 VCANP13611 3396 aa14.19□□□□□ -0.14
TMEM258-205ENST00000540434 MMP14P50281 582 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 STRIP1Q5VSL9 837 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 FBXO33Q7Z6M2 555 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 DEFB123Q8N688 67 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 COA1Q9GZY4 146 aa14.18□□□□□ -0.14
TMEM258-205ENST00000540434 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
TMEM258-205ENST00000540434 SPTBN5Q9NRC6 3674 aaKnown RBP14.18□□□□□ -0.14
TMEM258-205ENST00000540434 MYO3BQ8WXR4 1341 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 TESPA1A2RU30 521 aaPredicted RBP14.17□□□□□ -0.14
TMEM258-205ENST00000540434 CIAO1O76071 339 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 IL1R1P14778 569 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 ADORA1P30542 326 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 BCAMP50895 628 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 GTF2IP78347 998 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 TFCP2Q12800 502 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 GRIK5Q16478 980 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 CEP85Q6P2H3 762 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 DEFB129Q9H1M3 183 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 PCDHAC2Q9Y5I4 1007 aa14.17□□□□□ -0.14
TMEM258-205ENST00000540434 UNCXA6NJT0 531 aa14.16□□□□□ -0.14
TMEM258-205ENST00000540434 TIMM10P62072 90 aa14.16□□□□□ -0.14
TMEM258-205ENST00000540434 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms