RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MAP3K9P80192 1104 aa15.74■□□□□ 0.11
COPS7A-211ENST00000540408 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
COPS7A-211ENST00000540408 ZFYVE28Q9HCC9 887 aa15.74■□□□□ 0.11
COPS7A-211ENST00000540408 CSADQ9Y600 493 aa15.74■□□□□ 0.11
COPS7A-211ENST00000540408 NBPF11Q86T75 865 aa15.73■□□□□ 0.11
COPS7A-211ENST00000540408 PTPN18Q99952 460 aa15.73■□□□□ 0.11
COPS7A-211ENST00000540408 TMEM106CQ9BVX2 250 aa15.73■□□□□ 0.11
COPS7A-211ENST00000540408 AOX1Q06278 1338 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 POTEFA5A3E0 1075 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 HDLBPQ00341 1268 aaKnown RBP15.72■□□□□ 0.11
COPS7A-211ENST00000540408 CCL15Q16663 113 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 HOOK2Q96ED9 719 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
COPS7A-211ENST00000540408 TMEM39BQ9GZU3 492 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 TMOD2Q9NZR1 351 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 RIPOR2Q9Y4F9 1068 aa15.72■□□□□ 0.11
COPS7A-211ENST00000540408 CHAF1AQ13111 956 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-211ENST00000540408 TAF1CQ15572 869 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-211ENST00000540408 METTL24Q5JXM2 366 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-211ENST00000540408 FBXO33Q7Z6M2 555 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 TEKT1Q969V4 418 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 ARMC5Q96C12 935 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 MS4A4AQ96JQ5 239 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 TEPSINQ96N21 525 aa15.71■□□□□ 0.11
COPS7A-211ENST00000540408 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-211ENST00000540408 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
COPS7A-211ENST00000540408 VGLL4Q14135 290 aa15.7■□□□□ 0.1
COPS7A-211ENST00000540408 MRIQ9BWK5 157 aa15.7■□□□□ 0.1
COPS7A-211ENST00000540408 IQSEC3Q9UPP2 1182 aaPredicted RBP15.7■□□□□ 0.1
COPS7A-211ENST00000540408 A0A1B0GUL6 1792 aa15.7■□□□□ 0.1
COPS7A-211ENST00000540408 PDE8BO95263 885 aa15.69■□□□□ 0.1
COPS7A-211ENST00000540408 KIF22Q14807 665 aa15.69■□□□□ 0.1
COPS7A-211ENST00000540408 SLC9C1Q4G0N8 1177 aa15.69■□□□□ 0.1
COPS7A-211ENST00000540408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.69■□□□□ 0.1
COPS7A-211ENST00000540408 BRI3BPQ8WY22 251 aa15.69■□□□□ 0.1
COPS7A-211ENST00000540408 OTUD5Q96G74 571 aa15.69■□□□□ 0.1
COPS7A-211ENST00000540408 BICC1Q9H694 974 aaKnown RBP15.69■□□□□ 0.1
COPS7A-211ENST00000540408 UTYO14607 1347 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 MAST3O60307 1309 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 CETPP11597 493 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 ERO1BQ86YB8 467 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 CNKSR2Q8WXI2 1034 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 SUGT1Q9Y2Z0 365 aa15.68■□□□□ 0.1
COPS7A-211ENST00000540408 LAMB1P07942 1786 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 IFIT1P09914 478 aaKnown RBP15.67■□□□□ 0.1
COPS7A-211ENST00000540408 SLC4A8Q2Y0W8 1093 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
COPS7A-211ENST00000540408 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 FKBP1CQ5VVH2 108 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 DCAF15Q66K64 600 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 FAM83AQ86UY5 434 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 CDAN1Q8IWY9 1227 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 ZDHHC15Q96MV8 337 aa15.67■□□□□ 0.1
COPS7A-211ENST00000540408 ZCCHC17Q9NP64 241 aaKnown RBP15.67■□□□□ 0.1
COPS7A-211ENST00000540408 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 EN2P19622 333 aaPredicted RBP15.66■□□□□ 0.1
COPS7A-211ENST00000540408 BCAMP50895 628 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 SNAPC2Q13487 334 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 GRIK5Q16478 980 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 FAM43AQ8N2R8 423 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 ZNF333Q96JL9 665 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 WRNIP1Q96S55 665 aa15.66■□□□□ 0.1
COPS7A-211ENST00000540408 TLR2O60603 784 aa15.65■□□□□ 0.1
COPS7A-211ENST00000540408 GNRH1P01148 92 aa15.65■□□□□ 0.1
COPS7A-211ENST00000540408 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
COPS7A-211ENST00000540408 CACNB3P54284 484 aa15.65■□□□□ 0.1
COPS7A-211ENST00000540408 PUM3Q15397 648 aaKnown RBP15.65■□□□□ 0.1
COPS7A-211ENST00000540408 HABP4Q5JVS0 413 aaKnown RBP15.65■□□□□ 0.1
COPS7A-211ENST00000540408 HHIPL2Q6UWX4 724 aa15.65■□□□□ 0.1
COPS7A-211ENST00000540408 PTPRCP08575 1304 aa15.65■□□□□ 0.1
COPS7A-211ENST00000540408 WDR66Q8TBY9 1149 aa15.64■□□□□ 0.09
COPS7A-211ENST00000540408 ZKSCAN4Q969J2 545 aaPredicted RBP15.64■□□□□ 0.09
COPS7A-211ENST00000540408 ZNF341Q9BYN7 854 aa15.64■□□□□ 0.09
COPS7A-211ENST00000540408 PTCH2Q9Y6C5 1203 aa15.64■□□□□ 0.09
COPS7A-211ENST00000540408 SNCAIPQ9Y6H5 919 aa15.64■□□□□ 0.09
COPS7A-211ENST00000540408 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
COPS7A-211ENST00000540408 IRF6O14896 467 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 SLC5A1P13866 664 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 PRMT2P55345 433 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 PPIL2Q13356 520 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 APOBEC3HQ6NTF7 200 aaKnown RBP15.63■□□□□ 0.09
COPS7A-211ENST00000540408 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
COPS7A-211ENST00000540408 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 VGLL2Q8N8G2 317 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 OTOFQ9HC10 1997 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 ARAP2Q8WZ64 1704 aa15.63■□□□□ 0.09
COPS7A-211ENST00000540408 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
COPS7A-211ENST00000540408 LACTBP83111 547 aaPredicted RBP15.62■□□□□ 0.09
COPS7A-211ENST00000540408 CAP1Q01518 475 aa15.62■□□□□ 0.09
COPS7A-211ENST00000540408 PPATQ06203 517 aa15.62■□□□□ 0.09
COPS7A-211ENST00000540408 LPIN2Q92539 896 aa15.62■□□□□ 0.09
COPS7A-211ENST00000540408 HOXD10P28358 340 aa15.61■□□□□ 0.09
COPS7A-211ENST00000540408 MIGA2Q7L4E1 593 aa15.61■□□□□ 0.09
COPS7A-211ENST00000540408 KLHDC4Q8TBB5 520 aa15.61■□□□□ 0.09
COPS7A-211ENST00000540408 FAM151AQ8WW52 585 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms