RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 LINC00301Q8NCQ3 95 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
BNIP3-202ENST00000540159 PRKAB2O43741 272 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 MYSM1Q5VVJ2 828 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 ZBTB38Q8NAP3 1195 aaPredicted RBP15.9■□□□□ 0.14
BNIP3-202ENST00000540159 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 SEC31BQ9NQW1 1179 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 CTNNA3Q9UI47 895 aa15.9■□□□□ 0.14
BNIP3-202ENST00000540159 ADAMTS7Q9UKP4 1686 aa15.89■□□□□ 0.14
BNIP3-202ENST00000540159 CCDC69A6NI79 296 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 WTIPA6NIX2 430 aaPredicted RBP15.89■□□□□ 0.13
BNIP3-202ENST00000540159 METAP2P50579 478 aaKnown RBP eCLIP15.89■□□□□ 0.13
BNIP3-202ENST00000540159 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 AGXT2Q9BYV1 514 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 ZNF142P52746 1687 aaPredicted RBP15.89■□□□□ 0.13
BNIP3-202ENST00000540159 COL18A1P39060 1754 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
BNIP3-202ENST00000540159 CIAO1O76071 339 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 CEP57L1Q8IYX8 460 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
BNIP3-202ENST00000540159 ARMT1Q9H993 441 aa15.89■□□□□ 0.13
BNIP3-202ENST00000540159 hCG_1642624A0A1W2PR95 340 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 ANKRD18BA2A2Z9 1011 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 STARD3NLO95772 234 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
BNIP3-202ENST00000540159 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 AIDAQ96BJ3 306 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 MROH7-TTC4A0A0A0MT08 1334 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 NEDD4P46934 1319 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 MAGEB6Q8N7X4 407 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 RIPOR2Q9Y4F9 1068 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 ZNF202O95125 648 aa15.88■□□□□ 0.13
BNIP3-202ENST00000540159 PCCAP05165 728 aaPredicted RBP15.88■□□□□ 0.13
BNIP3-202ENST00000540159 ATP1A3P13637 1013 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 CTSWP56202 376 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 KCNQ4P56696 695 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 STRCP1A6NGW2 1772 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 PFKFB1P16118 471 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 SLC26A6Q9BXS9 759 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 KCNJ14Q9UNX9 436 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 RFX7Q2KHR2 1363 aa15.87■□□□□ 0.13
BNIP3-202ENST00000540159 MBD4O95243 580 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 TPM3P06753 285 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 SLC3A2P08195 630 aaKnown RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 PDE6AP16499 860 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 PDCL2Q8N4E4 241 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 XPO4Q9C0E2 1151 aaKnown RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 ADD2P35612 726 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 KIF23Q02241 960 aaPredicted RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 PNOCQ13519 176 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 ADALQ6DHV7 355 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 NUP133Q8WUM0 1156 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 GUCY1A2P33402 732 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 TMEM67Q5HYA8 995 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 ANO1Q5XXA6 986 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 KRT40Q6A162 431 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
BNIP3-202ENST00000540159 PDILTQ8N807 584 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 TMX1Q9H3N1 280 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 RTEL1Q9NZ71 1219 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 KIAA1468Q9P260 1216 aa15.86■□□□□ 0.13
BNIP3-202ENST00000540159 BAZ2BQ9UIF8 2168 aaKnown RBP15.85■□□□□ 0.13
BNIP3-202ENST00000540159 GLI3P10071 1580 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 FOXN1O15353 648 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 ANGEL1Q9UNK9 670 aaKnown RBP15.85■□□□□ 0.13
BNIP3-202ENST00000540159 DHX16O60231 1041 aaKnown RBP15.85■□□□□ 0.13
BNIP3-202ENST00000540159 BCAMP50895 628 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 ABCF2Q9UG63 623 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 ADAMTSL3P82987 1691 aa15.85■□□□□ 0.13
BNIP3-202ENST00000540159 UBN2Q6ZU65 1347 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 GOLGA8AA7E2F4 631 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 IFIT3O14879 490 aaKnown RBP15.84■□□□□ 0.13
BNIP3-202ENST00000540159 PDE8BO95263 885 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
BNIP3-202ENST00000540159 LRRFIP1Q32MZ4 808 aaKnown RBP15.84■□□□□ 0.13
BNIP3-202ENST00000540159 APOA5Q6Q788 366 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 NAPBQ9H115 298 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 MYO5AQ9Y4I1 1855 aaKnown RBP15.84■□□□□ 0.13
BNIP3-202ENST00000540159 CTAGE5O15320 804 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 CEP135Q66GS9 1140 aa15.84■□□□□ 0.13
BNIP3-202ENST00000540159 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
BNIP3-202ENST00000540159 CCDC112Q8NEF3 446 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms