RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
PRPF19-204ENST00000539960 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
PRPF19-204ENST00000539960 MCAMP43121 646 aa16.47■□□□□ 0.23
PRPF19-204ENST00000539960 SULF1Q8IWU6 871 aa16.47■□□□□ 0.23
PRPF19-204ENST00000539960 ZGPATQ8N5A5 531 aaKnown RBP16.47■□□□□ 0.23
PRPF19-204ENST00000539960 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
PRPF19-204ENST00000539960 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
PRPF19-204ENST00000539960 MAST3O60307 1309 aa16.46■□□□□ 0.23
PRPF19-204ENST00000539960 PRDX5P30044 214 aa16.46■□□□□ 0.23
PRPF19-204ENST00000539960 SPTY2D1Q68D10 685 aaPredicted RBP16.46■□□□□ 0.23
PRPF19-204ENST00000539960 PI16Q6UXB8 463 aa16.46■□□□□ 0.23
PRPF19-204ENST00000539960 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
PRPF19-204ENST00000539960 TEKT1Q969V4 418 aa16.46■□□□□ 0.23
PRPF19-204ENST00000539960 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 MYO1BO43795 1136 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
PRPF19-204ENST00000539960 CST9Q5W186 159 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 HHIPL2Q6UWX4 724 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
PRPF19-204ENST00000539960 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 HTRA3P83110 453 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 HDAC1Q13547 482 aaPredicted RBP16.44■□□□□ 0.22
PRPF19-204ENST00000539960 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 SCAF8Q9UPN6 1271 aaKnown RBP16.44■□□□□ 0.22
PRPF19-204ENST00000539960 AOX1Q06278 1338 aa16.44■□□□□ 0.22
PRPF19-204ENST00000539960 ARAP2Q8WZ64 1704 aa16.43■□□□□ 0.22
PRPF19-204ENST00000539960 SMARCA5O60264 1052 aaPredicted RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
PRPF19-204ENST00000539960 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 ZNF70Q9UC06 446 aaPredicted RBP16.43■□□□□ 0.22
PRPF19-204ENST00000539960 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
PRPF19-204ENST00000539960 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
PRPF19-204ENST00000539960 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
PRPF19-204ENST00000539960 ZAP70P43403 619 aa16.42■□□□□ 0.22
PRPF19-204ENST00000539960 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
PRPF19-204ENST00000539960 DNAJC5GQ8N7S2 189 aa16.42■□□□□ 0.22
PRPF19-204ENST00000539960 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
PRPF19-204ENST00000539960 RWDD1Q9H446 243 aaPredicted RBP16.42■□□□□ 0.22
PRPF19-204ENST00000539960 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 DZIP1Q86YF9 867 aaKnown RBP16.41■□□□□ 0.22
PRPF19-204ENST00000539960 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 ZNF408Q9H9D4 720 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 LRP2BPQ9P2M1 347 aa16.41■□□□□ 0.22
PRPF19-204ENST00000539960 MECOMQ03112 1051 aa16.4■□□□□ 0.22
PRPF19-204ENST00000539960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF19-204ENST00000539960 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
PRPF19-204ENST00000539960 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
PRPF19-204ENST00000539960 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
PRPF19-204ENST00000539960 DAGLAQ9Y4D2 1042 aa16.4■□□□□ 0.22
PRPF19-204ENST00000539960 POLR2AP24928 1970 aaKnown RBP16.39■□□□□ 0.21
PRPF19-204ENST00000539960 IGSF3O75054 1194 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 LDHCP07864 332 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 ATP5JP18859 108 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 GSTO1P78417 241 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 NSUN4Q96CB9 384 aaKnown RBP16.39■□□□□ 0.21
PRPF19-204ENST00000539960 RAI14Q9P0K7 980 aa16.39■□□□□ 0.21
PRPF19-204ENST00000539960 IGHDP01880 384 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 TNFAIP1Q13829 316 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 RASA3Q14644 834 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 C2orf69Q8N8R5 385 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 PIH1D3Q9NQM4 214 aaKnown RBP16.38■□□□□ 0.21
PRPF19-204ENST00000539960 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 PPP2R3BQ9Y5P8 575 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 NDUFB9Q9Y6M9 179 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 GAKO14976 1311 aa16.38■□□□□ 0.21
PRPF19-204ENST00000539960 TCP10L2B9ZVM9 353 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 DEFB115Q30KQ5 88 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 ANTXR1Q9H6X2 564 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 GBA2Q9HCG7 927 aaPredicted RBP16.37■□□□□ 0.21
PRPF19-204ENST00000539960 ECHDC1Q9NTX5 307 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 TMOD2Q9NZR1 351 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
PRPF19-204ENST00000539960 ABT1Q9ULW3 272 aaKnown RBP16.37■□□□□ 0.21
PRPF19-204ENST00000539960 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
PRPF19-204ENST00000539960 GPR75-ASB3A0A0A6YYF3 556 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 TNNI2P48788 182 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 CACNB3P54284 484 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 TTF1Q15361 905 aaPredicted RBP16.36■□□□□ 0.21
PRPF19-204ENST00000539960 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
PRPF19-204ENST00000539960 SAPCD2Q86UD0 394 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 SMC5Q8IY18 1101 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 BOLA2Q9H3K6 86 aa16.36■□□□□ 0.21
PRPF19-204ENST00000539960 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
PRPF19-204ENST00000539960 NF2P35240 595 aa16.35■□□□□ 0.21
PRPF19-204ENST00000539960 SUPT20HL1Q3ZLR7 823 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms