RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 ZGPATQ8N5A5 531 aaKnown RBP20.08■□□□□ 0.81
COPS3-212ENST00000539941 TDRD7Q8NHU6 1098 aaKnown RBP20.08■□□□□ 0.81
COPS3-212ENST00000539941 STRBPQ96SI9 672 aaKnown RBP20.08■□□□□ 0.81
COPS3-212ENST00000539941 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
COPS3-212ENST00000539941 ABCF2Q9UG63 623 aa20.08■□□□□ 0.81
COPS3-212ENST00000539941 SALL1Q9NSC2 1324 aa20.08■□□□□ 0.8
COPS3-212ENST00000539941 AK2P54819 239 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 ANKRD1Q15327 319 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 IMMTQ16891 758 aaKnown RBP20.07■□□□□ 0.8
COPS3-212ENST00000539941 INTS4Q96HW7 963 aaKnown RBP20.07■□□□□ 0.8
COPS3-212ENST00000539941 NEK1Q96PY6 1258 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 RAI14Q9P0K7 980 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 LIMCH1Q9UPQ0 1083 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 CACNA1SQ13698 1873 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 MAST2Q6P0Q8 1798 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 ALX1Q15699 326 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 SPTY2D1Q68D10 685 aaPredicted RBP20.07■□□□□ 0.8
COPS3-212ENST00000539941 NLGN2Q8NFZ4 835 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 TBC1D16Q8TBP0 767 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 WDR66Q8TBY9 1149 aa20.07■□□□□ 0.8
COPS3-212ENST00000539941 TMX4Q9H1E5 349 aaPredicted RBP20.07■□□□□ 0.8
COPS3-212ENST00000539941 H0YIN7 160 aa20.06■□□□□ 0.8
COPS3-212ENST00000539941 FGAP02671 866 aa20.06■□□□□ 0.8
COPS3-212ENST00000539941 C2CD5Q86YS7 1000 aa20.06■□□□□ 0.8
COPS3-212ENST00000539941 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
COPS3-212ENST00000539941 ZSCAN31Q96LW9 406 aaPredicted RBP20.06■□□□□ 0.8
COPS3-212ENST00000539941 TAF6LQ9Y6J9 622 aa20.06■□□□□ 0.8
COPS3-212ENST00000539941 CYP7A1P22680 504 aa20.05■□□□□ 0.8
COPS3-212ENST00000539941 PATL2C9JE40 543 aaKnown RBP20.04■□□□□ 0.8
COPS3-212ENST00000539941 MBD4O95243 580 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 IL1R1P14778 569 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 CPA1P15085 419 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 SLC51AQ86UW1 340 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 SH2B1Q9NRF2 756 aaPredicted RBP20.04■□□□□ 0.8
COPS3-212ENST00000539941 POLLQ9UGP5 575 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 CCDC88AQ3V6T2 1871 aa20.04■□□□□ 0.8
COPS3-212ENST00000539941 YY1P25490 414 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
COPS3-212ENST00000539941 LAMA4Q16363 1823 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 GOLGB1Q14789 3259 aaKnown RBP20.03■□□□□ 0.8
COPS3-212ENST00000539941 KIAA1551Q9HCM1 1747 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 E7EWF7 191 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
COPS3-212ENST00000539941 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 STOX1Q6ZVD7 989 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 CNKSR1Q969H4 720 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 NSUN4Q96CB9 384 aaKnown RBP20.03■□□□□ 0.8
COPS3-212ENST00000539941 CD209Q9NNX6 404 aa20.03■□□□□ 0.8
COPS3-212ENST00000539941 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 ZNF213O14771 459 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
COPS3-212ENST00000539941 MPNDQ8N594 471 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.8
COPS3-212ENST00000539941 NACAP1Q9BZK3 213 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 ARMT1Q9H993 441 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
COPS3-212ENST00000539941 MAGEB6P1A0A0J9YX57 407 aa20.01■□□□□ 0.79
COPS3-212ENST00000539941 APPP05067 770 aa20.01■□□□□ 0.79
COPS3-212ENST00000539941 DHX32Q7L7V1 743 aaKnown RBP20.01■□□□□ 0.79
COPS3-212ENST00000539941 CD2APQ9Y5K6 639 aa20.01■□□□□ 0.79
COPS3-212ENST00000539941 MECOMQ03112 1051 aa20■□□□□ 0.79
COPS3-212ENST00000539941 L1TD1Q5T7N2 865 aaKnown RBP20■□□□□ 0.79
COPS3-212ENST00000539941 IFNL3Q8IZI9 196 aa20■□□□□ 0.79
COPS3-212ENST00000539941 LCORLQ8N3X6 602 aa20■□□□□ 0.79
COPS3-212ENST00000539941 GPR101Q96P66 508 aaPredicted RBP20■□□□□ 0.79
COPS3-212ENST00000539941 GSG1L2A8MUP6 293 aa20■□□□□ 0.79
COPS3-212ENST00000539941 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
COPS3-212ENST00000539941 ADGRA1Q86SQ6 560 aa20■□□□□ 0.79
COPS3-212ENST00000539941 RIOK1Q9BRS2 568 aaKnown RBP20■□□□□ 0.79
COPS3-212ENST00000539941 COA1Q9GZY4 146 aa20■□□□□ 0.79
COPS3-212ENST00000539941 NAPBQ9H115 298 aa20■□□□□ 0.79
COPS3-212ENST00000539941 RRP9O43818 475 aaKnown RBP19.99■□□□□ 0.79
COPS3-212ENST00000539941 NUCB2P80303 420 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 GPR162Q16538 588 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 MIGA1Q8NAN2 632 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 ZNF384Q8TF68 577 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 EPB41L4AQ9HCS5 686 aaPredicted RBP19.99■□□□□ 0.79
COPS3-212ENST00000539941 SLC4A4Q9Y6R1 1079 aa19.99■□□□□ 0.79
COPS3-212ENST00000539941 DLEC1Q9Y238 1755 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 FAM205AQ6ZU69 1335 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 WDR19Q8NEZ3 1342 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 A0A0G2JLW4 131 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 LDHBP07195 334 aaKnown RBP19.98■□□□□ 0.79
COPS3-212ENST00000539941 PRDX5P30044 214 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 GSTO1P78417 241 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 EXOSC10Q01780 885 aaKnown RBP19.98■□□□□ 0.79
COPS3-212ENST00000539941 TOB2Q14106 344 aaPredicted RBP19.98■□□□□ 0.79
COPS3-212ENST00000539941 RAB3GAP1Q15042 981 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 CC2D2BQ6DHV5 1058 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 DZIP1Q86YF9 867 aaKnown RBP19.98■□□□□ 0.79
COPS3-212ENST00000539941 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 EYA3Q99504 573 aa19.98■□□□□ 0.79
COPS3-212ENST00000539941 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.98■□□□□ 0.79
COPS3-212ENST00000539941 GIMAP6Q6P9H5 292 aa19.97■□□□□ 0.79
COPS3-212ENST00000539941 NCOA7Q8NI08 942 aa19.97■□□□□ 0.79
COPS3-212ENST00000539941 AGXT2Q9BYV1 514 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms