RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 TBC1D22AQ8WUA7 517 aa15.88■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 LPIN2Q92539 896 aa15.88■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 ABHD8Q96I13 439 aa15.88■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SAGE1Q9NXZ1 904 aa15.88■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SSC5DA1L4H1 1573 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 TCP10L2B9ZVM9 353 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CIAO1O76071 339 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CASP8AP2Q9UKL3 1982 aa15.87■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 PPP1R12BO60237 982 aaPredicted RBP15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SUPT20HL1Q3ZLR7 823 aa15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 TEKT1Q969V4 418 aa15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SRGAP3O43295 1099 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 IL15P40933 162 aaPredicted RBP15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CACNB3P54284 484 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 DGKZQ13574 1117 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 LDLRAD1Q5T700 205 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 SLC10A4Q96EP9 437 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CDAN1Q8IWY9 1227 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 MCOLN1Q9GZU1 580 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 TMEM39BQ9GZU3 492 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 MAST3O60307 1309 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 MYH13Q9UKX3 1938 aa15.84■□□□□ 0.13
TSPAN9-IT1-201ENST00000539784 CCDC85CA6NKD9 419 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ADORA1P30542 326 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 PHKA1P46020 1223 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 IREB2P48200 963 aaKnown RBP15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TNNI2P48788 182 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 HDLBPQ00341 1268 aaKnown RBP15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 MAP3K11Q16584 847 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 SPRYD7Q5W111 196 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TMEM57Q8N5G2 664 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 WDR66Q8TBY9 1149 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 GNL3LQ9NVN8 582 aaKnown RBP15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TMOD2Q9NZR1 351 aa15.83■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 USP2O75604 605 aaPredicted RBP15.82■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 GNAI2P04899 355 aa15.82■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 SREBF2Q12772 1141 aa15.82■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 PRDX5P30044 214 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TM4SF4P48230 202 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TIMM10P62072 90 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TFCP2Q12800 502 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 WNK4Q96J92 1243 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ZDHHC15Q96MV8 337 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 SUGT1Q9Y2Z0 365 aa15.81■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 LDHBP07195 334 aaKnown RBP15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 MTX1Q13505 466 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 DIXDC1Q155Q3 683 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 CCDC102BQ68D86 513 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 APOBEC3HQ6NTF7 200 aaKnown RBP15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ANKRD13AQ8IZ07 590 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TEPSINQ96N21 525 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 PNMA6EA0A0J9YXQ4 647 aa15.79■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 A0A1B0GUL7 405 aa15.79■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 HHIPL2Q6UWX4 724 aa15.79■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 NEUROD6Q96NK8 337 aa15.79■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 MANSC4A6NHS7 340 aaPredicted RBP15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ZBTB48P10074 688 aaPredicted RBP15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 GJA5P36382 358 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ITPRIPQ8IWB1 547 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 XAGE2Q96GT9 111 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 MRIQ9BWK5 157 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 C1orf115Q9H7X2 142 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 DAGLAQ9Y4D2 1042 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 SEMA3EO15041 775 aa15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 GORABQ5T7V8 394 aa15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ZNF296Q8WUU4 475 aaPredicted RBP15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 OPTNQ96CV9 577 aa15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 ABCF2Q9UG63 623 aa15.77■□□□□ 0.12
TSPAN9-IT1-201ENST00000539784 UNCXA6NJT0 531 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 GPR25O00155 361 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 TCP10Q12799 353 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 VGLL4Q14135 290 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 CDC42EP5Q6NZY7 148 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 CTU1Q7Z7A3 348 aaKnown RBP15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 FAM83AQ86UY5 434 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 R3HDMLQ9H3Y0 253 aa15.76■□□□□ 0.11
TSPAN9-IT1-201ENST00000539784 CSADQ9Y600 493 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms