RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DENND2AQ9ULE3 1009 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 PARP4Q9UKK3 1724 aaKnown RBP23.55■■□□□ 1.36
TMEM260-203ENST00000539559 RNF113AO15541 343 aaKnown RBP23.55■■□□□ 1.36
TMEM260-203ENST00000539559 WASHC4Q2M389 1173 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 HOMER1Q86YM7 354 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 DPF2Q92785 391 aa23.55■■□□□ 1.36
TMEM260-203ENST00000539559 MROH7-TTC4A0A0A0MT08 1334 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 ATL3Q6DD88 541 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 A0A1B0GUL7 405 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 FOXP2O15409 715 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 TTLL7Q6ZT98 887 aa23.54■■□□□ 1.36
TMEM260-203ENST00000539559 WDHD1O75717 1129 aaPredicted RBP23.53■■□□□ 1.36
TMEM260-203ENST00000539559 PFKFB1P16118 471 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 RXRAP19793 462 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 HSP90AA4PQ58FG1 418 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 A0A1W2PQ27 194 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 A0A1W2PQ64 194 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 A0A1W2PQD8 194 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 DNAI1Q9UI46 699 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 HPS5Q9UPZ3 1129 aa23.53■■□□□ 1.36
TMEM260-203ENST00000539559 PRC1O43663 620 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 FBXO18Q8NFZ0 1043 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 NKX2-3Q8TAU0 364 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 IMPACTQ9P2X3 320 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 ADORA1P30542 326 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 FANCCQ00597 558 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 PI16Q6UXB8 463 aa23.52■■□□□ 1.36
TMEM260-203ENST00000539559 NLRP12P59046 1061 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 FAM177A1Q8N128 213 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-203ENST00000539559 TMX1Q9H3N1 280 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 AXDND1Q5T1B0 1012 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-203ENST00000539559 SYNE3Q6ZMZ3 975 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 KCNG4Q8TDN1 519 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 HSD3B7Q9H2F3 369 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 ZBTB3Q9H5J0 574 aa23.51■■□□□ 1.35
TMEM260-203ENST00000539559 NBPF26B4DH59 902 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 CPLX1O14810 134 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 ZBTB22O15209 634 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 FANCGO15287 622 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 CLCN6P51797 869 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 NBPF14Q5TI25 921 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 NBPF10Q6P3W6 841 aaKnown RBP23.5■■□□□ 1.35
TMEM260-203ENST00000539559 NBPF15Q8N660 670 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 CCDC150Q8NCX0 1101 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 L2HGDHQ9H9P8 463 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 FGAP02671 866 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 ANTXR2P58335 489 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 ARHGAP29Q52LW3 1261 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 PLBD2Q8NHP8 589 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 EPC1Q9H2F5 836 aa23.5■■□□□ 1.35
TMEM260-203ENST00000539559 SCARF1Q14162 830 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 ANO1Q5XXA6 986 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 POLR3EQ9NVU0 708 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 FAM53CQ9NYF3 392 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEM260-203ENST00000539559 ERVV-2B6SEH9 535 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 TMEM232C9JQI7 657 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 CCDC93Q567U6 631 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 KCND1Q9NSA2 647 aa23.49■■□□□ 1.35
TMEM260-203ENST00000539559 PNOCQ13519 176 aa23.48■■□□□ 1.35
TMEM260-203ENST00000539559 H7C1W4 665 aa23.48■■□□□ 1.35
TMEM260-203ENST00000539559 YEATS4O95619 227 aa23.48■■□□□ 1.35
TMEM260-203ENST00000539559 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
TMEM260-203ENST00000539559 CLIC6Q96NY7 704 aa23.48■■□□□ 1.35
TMEM260-203ENST00000539559 PUS7LQ9H0K6 701 aaKnown RBP23.48■■□□□ 1.35
TMEM260-203ENST00000539559 H2AFXP16104 143 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-203ENST00000539559 KIF23Q02241 960 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-203ENST00000539559 KIF2AO00139 706 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-203ENST00000539559 EYA2O00167 538 aa23.47■■□□□ 1.35
TMEM260-203ENST00000539559 IL15P40933 162 aaPredicted RBP23.47■■□□□ 1.35
TMEM260-203ENST00000539559 UTP14AQ9BVJ6 771 aaKnown RBP23.47■■□□□ 1.35
TMEM260-203ENST00000539559 PSDA5PKW4 1024 aaPredicted RBP23.46■■□□□ 1.35
TMEM260-203ENST00000539559 UBE2Q2LH0YL09 131 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 SERPINC1P01008 464 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 IMMTQ16891 758 aaKnown RBP23.46■■□□□ 1.35
TMEM260-203ENST00000539559 BPIFA3Q9BQP9 254 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 ARFGEF2Q9Y6D5 1785 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 A1BGP04217 495 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 UBASH3AP57075 661 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 CFAP100Q494V2 611 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 BTG4Q9NY30 223 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 FHOD1Q9Y613 1164 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 TPM4P67936 248 aa23.46■■□□□ 1.35
TMEM260-203ENST00000539559 MB21D2Q8IYB1 491 aaPredicted RBP23.46■■□□□ 1.35
TMEM260-203ENST00000539559 URI1O94763 535 aaPredicted RBP23.45■■□□□ 1.34
TMEM260-203ENST00000539559 SYKP43405 635 aa23.45■■□□□ 1.34
TMEM260-203ENST00000539559 PHKBQ93100 1093 aa23.45■■□□□ 1.34
TMEM260-203ENST00000539559 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
TMEM260-203ENST00000539559 SPECC1Q5M775 1068 aa23.45■■□□□ 1.34
TMEM260-203ENST00000539559 SENP2Q9HC62 589 aa23.45■■□□□ 1.34
TMEM260-203ENST00000539559 SEC31AO94979 1220 aaKnown RBP23.44■■□□□ 1.34
TMEM260-203ENST00000539559 CMA1P23946 247 aa23.44■■□□□ 1.34
TMEM260-203ENST00000539559 EVCP57679 992 aa23.44■■□□□ 1.34
TMEM260-203ENST00000539559 ETF1P62495 437 aaKnown RBP23.44■■□□□ 1.34
TMEM260-203ENST00000539559 STK11IPQ8N1F8 1099 aa23.44■■□□□ 1.34
TMEM260-203ENST00000539559 ZNF330Q9Y3S2 320 aaPredicted RBP23.44■■□□□ 1.34
TMEM260-203ENST00000539559 ZAP70P43403 619 aa23.44■■□□□ 1.34
TMEM260-203ENST00000539559 TTC39AQ5SRH9 613 aa23.44■■□□□ 1.34
TMEM260-203ENST00000539559 SHC4Q6S5L8 630 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms