RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 BCORL1Q5H9F3 1711 aa5.36□□□□□ -1.55
AC055720.1-201ENST00000539552 FAM196BA6NMK8 535 aa5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 CYP26A1O43174 497 aa5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 FARP2O94887 1054 aaPredicted RBP5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 HYAL2Q12891 473 aa5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 ZNF648Q5T619 568 aaPredicted RBP5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 KIAA1211Q6ZU35 1233 aa5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 KSR1Q8IVT5 923 aa5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 BSDC1Q9NW68 430 aaPredicted RBP5.35□□□□□ -1.55
AC055720.1-201ENST00000539552 CLSTN1O94985 981 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 ITGB5P18084 799 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 MAP4P27816 1152 aaKnown RBP5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 SCNN1AP37088 669 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 KANK4Q5T7N3 995 aaPredicted RBP5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 PAOXQ6QHF9 649 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 CBLL1Q75N03 491 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 NOL8Q76FK4 1167 aaKnown RBP5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 NLRP13Q86W25 1043 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 STK32AQ8WU08 396 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 RUSC1Q9BVN2 902 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 KCNK4Q9NYG8 393 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 USP20Q9Y2K6 914 aa5.34□□□□□ -1.55
AC055720.1-201ENST00000539552 PLEKHD1A6NEE1 506 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L15C9J2P7 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L10C9JJH3 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L13C9JLJ4 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L12C9JPN9 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L11C9JVI0 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L21D6R901 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L18D6R9N7 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L22D6RA61 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L17D6RBQ6 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L19D6RCP7 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L20D6RJB6 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 PRNPP04156 253 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 HOXD8P13378 290 aaPredicted RBP5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 PTPRAP18433 802 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 PREPP48147 710 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 ARL4DP49703 201 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 USP17L24Q0WX57 530 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 NFKBIBQ15653 356 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 ZNF124Q15973 351 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 UBASH3BQ8TF42 649 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 GIPC2Q8TF65 315 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 YIPF2Q9BWQ6 316 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 BRPF3Q9ULD4 1205 aa5.33□□□□□ -1.56
AC055720.1-201ENST00000539552 CFAP43Q8NDM7 1665 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 SSFA2P28290 1259 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 ITGAEP38570 1179 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 MSMPQ1L6U9 139 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 NOM1Q5C9Z4 860 aaKnown RBP5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 TTC39BQ5VTQ0 682 aaPredicted RBP5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 TREML1Q86YW5 311 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 LRP5O75197 1615 aa5.32□□□□□ -1.56
AC055720.1-201ENST00000539552 MAP3K4Q9Y6R4 1608 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 GLI2P10070 1586 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 SOWAHDA6NJG2 315 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 DDX3YO15523 660 aaKnown RBP5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 FOXO3O43524 673 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 MARCH6O60337 910 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 F13BP05160 661 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 USP11P51784 963 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 SWI5Q1ZZU3 235 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 NUTM2GQ5VZR2 741 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 GIMAP6Q6P9H5 292 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 C12orf50Q8NA57 414 aaPredicted RBP5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 CLP1Q92989 425 aaKnown RBP5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 WNT8BQ93098 351 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 ZMIZ1Q9ULJ6 1067 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 EP400Q96L91 3159 aa5.31□□□□□ -1.56
AC055720.1-201ENST00000539552 FAM95CA0A1B0GW59 222 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 OPLAHO14841 1288 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 LGR5O75473 907 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 ABL1P00519 1130 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 NLRP12P59046 1061 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 PIP4K2BP78356 416 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 ATP11AP98196 1134 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 DUSP27Q5VZP5 1158 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 ANKMY2Q8IV38 441 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 ZSCAN29Q8IWY8 852 aaPredicted RBP5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 KLHDC7BQ96G42 594 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 TBC1D32Q96NH3 1257 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 QTRT2Q9H974 415 aaKnown RBP5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 CYP4F12Q9HCS2 524 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 OSGEPQ9NPF4 335 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 FNDC3AQ9Y2H6 1198 aaKnown RBP5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 ALKQ9UM73 1620 aa5.3□□□□□ -1.56
AC055720.1-201ENST00000539552 PREX1Q8TCU6 1659 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 UBAP1LF5GYI3 381 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 H3BRJ5 948 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 RECKO95980 971 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 PLCL1Q15111 1095 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
AC055720.1-201ENST00000539552 SGO2Q562F6 1265 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms