RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 ADD2P35612 726 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 NMIQ13287 307 aaPredicted RBP12.84□□□□□ -0.35
LEMD3-202ENST00000539442 UBE3CQ15386 1083 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 ZMYM1Q5SVZ6 1142 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
LEMD3-202ENST00000539442 CWC27Q6UX04 472 aaKnown RBP12.84□□□□□ -0.35
LEMD3-202ENST00000539442 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
LEMD3-202ENST00000539442 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 HELLSQ9NRZ9 838 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
LEMD3-202ENST00000539442 DOCK2Q92608 1830 aa12.83□□□□□ -0.35
LEMD3-202ENST00000539442 A0A0D9SFI3 127 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 G3V3G9 751 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
LEMD3-202ENST00000539442 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 APPBP2Q92624 585 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 FAM227BQ96M60 508 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 BCS1LQ9Y276 419 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 LTBP3Q9NS15 1303 aa12.83□□□□□ -0.36
LEMD3-202ENST00000539442 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 PDE6AP16499 860 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 KIAA1211Q6ZU35 1233 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 ERICH6Q7L0X2 663 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 TAOK3Q9H2K8 898 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 ABCF2Q9UG63 623 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
LEMD3-202ENST00000539442 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
LEMD3-202ENST00000539442 AOC3Q16853 763 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 IL25Q9H293 177 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 RAI14Q9P0K7 980 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 WWC3Q9ULE0 1092 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 SUGT1Q9Y2Z0 365 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
LEMD3-202ENST00000539442 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 ECE2O60344 883 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 LDHBP07195 334 aaKnown RBP12.8□□□□□ -0.36
LEMD3-202ENST00000539442 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 USP26Q9BXU7 913 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 C22orf23Q9BZE7 217 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 MAST3O60307 1309 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 CCDC171Q6TFL3 1326 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 ZNF532Q9HCE3 1301 aa12.8□□□□□ -0.36
LEMD3-202ENST00000539442 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 NFKBIEO00221 500 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 MCCP23508 829 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 PRDX5P30044 214 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 GTF2IP78347 998 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 GSTO1P78417 241 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 MFSD14BQ5SR56 506 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 ZNF589Q86UQ0 364 aaPredicted RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 NSUN4Q96CB9 384 aaKnown RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 LSG1Q9H089 658 aaKnown RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
LEMD3-202ENST00000539442 MYH7P12883 1935 aa12.79□□□□□ -0.36
LEMD3-202ENST00000539442 CHGBP05060 677 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 CYP7A1P22680 504 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 MECOMQ03112 1051 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 NIM1KQ8IY84 436 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 SLAIN1Q8ND83 568 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
LEMD3-202ENST00000539442 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 TMEM121BQ9BXQ6 578 aaPredicted RBP12.78□□□□□ -0.36
LEMD3-202ENST00000539442 PUS7LQ9H0K6 701 aaKnown RBP12.78□□□□□ -0.36
LEMD3-202ENST00000539442 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
LEMD3-202ENST00000539442 USP17L3A6NCW0 530 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 USP17L4A6NCW7 530 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 M0R2C6 588 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 GPAA1O43292 621 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 LDHCP07864 332 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 USP17L1Q7RTZ2 530 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 CERS3Q8IU89 383 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
LEMD3-202ENST00000539442 GNAT2P19087 354 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 HSPA4P34932 840 aa12.76□□□□□ -0.37
LEMD3-202ENST00000539442 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms