RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 COG6Q9Y2V7 657 aa19.38■□□□□ 0.69
CIT-210ENST00000539413 FOXN1O15353 648 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 MAP2K2P36507 400 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 FKBP1BP68106 108 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 HDLBPQ00341 1268 aaKnown RBP19.37■□□□□ 0.69
CIT-210ENST00000539413 SPDYE2Q495Y8 402 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 CEP85Q6P2H3 762 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 ZNF70Q9UC06 446 aaPredicted RBP19.37■□□□□ 0.69
CIT-210ENST00000539413 DENND2AQ9ULE3 1009 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 SUGT1Q9Y2Z0 365 aa19.37■□□□□ 0.69
CIT-210ENST00000539413 FAM155AB1AL88 458 aaPredicted RBP19.36■□□□□ 0.69
CIT-210ENST00000539413 UBE2Q2LH0YL09 131 aa19.36■□□□□ 0.69
CIT-210ENST00000539413 SEMA3EO15041 775 aa19.36■□□□□ 0.69
CIT-210ENST00000539413 SURF6O75683 361 aaKnown RBP19.36■□□□□ 0.69
CIT-210ENST00000539413 NF2P35240 595 aa19.36■□□□□ 0.69
CIT-210ENST00000539413 ZNF157P51786 506 aaPredicted RBP19.36■□□□□ 0.69
CIT-210ENST00000539413 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
CIT-210ENST00000539413 TTLL12Q14166 644 aaPredicted RBP19.36■□□□□ 0.69
CIT-210ENST00000539413 AIDAQ96BJ3 306 aa19.36■□□□□ 0.69
CIT-210ENST00000539413 MAST3O60307 1309 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 PRDX5P30044 214 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 OS9Q13438 667 aaPredicted RBP19.35■□□□□ 0.69
CIT-210ENST00000539413 RASGRF1Q13972 1273 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 PRKG1Q13976 671 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 ZIC5Q96T25 663 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 DDX19BQ9UMR2 479 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 PPP2R3BQ9Y5P8 575 aa19.35■□□□□ 0.69
CIT-210ENST00000539413 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 ZBTB22O15209 634 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 NOGQ13253 232 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 RASA3Q14644 834 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 C20orf194Q5TEA3 1177 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 ZDHHC15Q96MV8 337 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 MRIQ9BWK5 157 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 FZD1Q9UP38 647 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CIT-210ENST00000539413 SSC5DA1L4H1 1573 aa19.34■□□□□ 0.69
CIT-210ENST00000539413 SLC10A3P09131 477 aa19.33■□□□□ 0.68
CIT-210ENST00000539413 COL13A1Q5TAT6 717 aaPredicted RBP19.33■□□□□ 0.68
CIT-210ENST00000539413 HHIPL2Q6UWX4 724 aa19.33■□□□□ 0.68
CIT-210ENST00000539413 TCP10L2B9ZVM9 353 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 LDHBP07195 334 aaKnown RBP19.32■□□□□ 0.68
CIT-210ENST00000539413 CACNB3P54284 484 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 TNFAIP1Q13829 316 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 TNNI3KQ59H18 835 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 NBPF12Q5TAG4 269 aaPredicted RBP19.32■□□□□ 0.68
CIT-210ENST00000539413 APOBEC3HQ6NTF7 200 aaKnown RBP19.32■□□□□ 0.68
CIT-210ENST00000539413 RASAL3Q86YV0 1011 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
CIT-210ENST00000539413 GPR108Q9NPR9 543 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 ZBTB40Q9NUA8 1239 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 FPGT-TNNI3KV9GXZ4 949 aa19.32■□□□□ 0.68
CIT-210ENST00000539413 PDS5AQ29RF7 1337 aaKnown RBP19.31■□□□□ 0.68
CIT-210ENST00000539413 CTCFP49711 727 aaPredicted RBP19.31■□□□□ 0.68
CIT-210ENST00000539413 ARMC9Q7Z3E5 817 aa19.31■□□□□ 0.68
CIT-210ENST00000539413 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.31■□□□□ 0.68
CIT-210ENST00000539413 ANGEL1Q9UNK9 670 aaKnown RBP19.31■□□□□ 0.68
CIT-210ENST00000539413 KIF23Q02241 960 aaPredicted RBP19.3■□□□□ 0.68
CIT-210ENST00000539413 PDE3AQ14432 1141 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 SUPT20HL1Q3ZLR7 823 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 PI16Q6UXB8 463 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 CDAN1Q8IWY9 1227 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
CIT-210ENST00000539413 DBNDD2Q9BQY9 259 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 BEGAINQ9BUH8 593 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 HMG20BQ9P0W2 317 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 ABCF2Q9UG63 623 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 EXOC6BQ9Y2D4 811 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 DAGLAQ9Y4D2 1042 aa19.3■□□□□ 0.68
CIT-210ENST00000539413 HSPA8P11142 646 aaKnown RBP19.29■□□□□ 0.68
CIT-210ENST00000539413 ARID4AP29374 1257 aaPredicted RBP19.29■□□□□ 0.68
CIT-210ENST00000539413 TNNI2P48788 182 aa19.29■□□□□ 0.68
CIT-210ENST00000539413 TEPSINQ96N21 525 aa19.29■□□□□ 0.68
CIT-210ENST00000539413 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
CIT-210ENST00000539413 PPP1R12BO60237 982 aaPredicted RBP19.28■□□□□ 0.68
CIT-210ENST00000539413 LBX1P52954 281 aa19.28■□□□□ 0.68
CIT-210ENST00000539413 LDLRAD1Q5T700 205 aa19.28■□□□□ 0.68
CIT-210ENST00000539413 SIRT2Q8IXJ6 389 aa19.28■□□□□ 0.68
CIT-210ENST00000539413 RPAP2Q8IXW5 612 aaPredicted RBP19.28■□□□□ 0.68
CIT-210ENST00000539413 SPATA5Q8NB90 893 aa19.28■□□□□ 0.68
CIT-210ENST00000539413 TMOD2Q9NZR1 351 aa19.28■□□□□ 0.68
CIT-210ENST00000539413 UQCRFS1P1P0C7P4 283 aa19.27■□□□□ 0.68
CIT-210ENST00000539413 MCAMP43121 646 aa19.27■□□□□ 0.68
CIT-210ENST00000539413 MAP3K11Q16584 847 aa19.27■□□□□ 0.68
CIT-210ENST00000539413 CHMP4BQ9H444 224 aaKnown RBP19.27■□□□□ 0.68
CIT-210ENST00000539413 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
CIT-210ENST00000539413 USP2O75604 605 aaPredicted RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 TTC39AQ5SRH9 613 aa19.26■□□□□ 0.67
CIT-210ENST00000539413 SPTY2D1Q68D10 685 aaPredicted RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
CIT-210ENST00000539413 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
CIT-210ENST00000539413 DZIP1Q86YF9 867 aaKnown RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 EAF2Q96CJ1 260 aaPredicted RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 CCDC8Q9H0W5 538 aaPredicted RBP19.26■□□□□ 0.67
CIT-210ENST00000539413 PRDM10Q9NQV6 1147 aa19.26■□□□□ 0.67
CIT-210ENST00000539413 TLR7Q9NYK1 1049 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms