RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 CTU1Q7Z7A3 348 aaKnown RBP31.32■■■□□ 2.6
TM7SF3-207ENST00000539399 SLC10A4Q96EP9 437 aa31.32■■■□□ 2.6
TM7SF3-207ENST00000539399 RFX5P48382 616 aaPredicted RBP31.31■■■□□ 2.6
TM7SF3-207ENST00000539399 DZIP1LQ8IYY4 767 aaKnown RBP31.31■■■□□ 2.6
TM7SF3-207ENST00000539399 CRKP46108 304 aa31.3■■■□□ 2.6
TM7SF3-207ENST00000539399 BCAMP50895 628 aa31.3■■■□□ 2.6
TM7SF3-207ENST00000539399 ZNF296Q8WUU4 475 aaPredicted RBP31.3■■■□□ 2.6
TM7SF3-207ENST00000539399 FRAT2O75474 233 aaPredicted RBP31.29■■■□□ 2.6
TM7SF3-207ENST00000539399 USP2O75604 605 aaPredicted RBP31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 FGFR2P21802 821 aa31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 MLLT1Q03111 559 aaPredicted RBP31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 TNFAIP1Q13829 316 aa31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 PUM3Q15397 648 aaKnown RBP31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 FRAT1Q92837 279 aaPredicted RBP31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 WNK4Q96J92 1243 aa31.28■■■□□ 2.6
TM7SF3-207ENST00000539399 BCAR3O75815 825 aa31.27■■■□□ 2.6
TM7SF3-207ENST00000539399 INTS3Q68E01 1043 aaKnown RBP31.27■■■□□ 2.6
TM7SF3-207ENST00000539399 ATF7IPQ6VMQ6 1270 aa31.27■■■□□ 2.6
TM7SF3-207ENST00000539399 TBC1D22AQ8WUA7 517 aa31.27■■■□□ 2.6
TM7SF3-207ENST00000539399 R3HDMLQ9H3Y0 253 aa31.27■■■□□ 2.6
TM7SF3-207ENST00000539399 EYA2O00167 538 aa31.26■■■□□ 2.59
TM7SF3-207ENST00000539399 IREB2P48200 963 aaKnown RBP31.26■■■□□ 2.59
TM7SF3-207ENST00000539399 CDAN1Q8IWY9 1227 aa31.26■■■□□ 2.59
TM7SF3-207ENST00000539399 TCP10L2B9ZVM9 353 aa31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 GPR25O00155 361 aa31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 IFIT1P09914 478 aaKnown RBP31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 ZBTB48P10074 688 aaPredicted RBP31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 TRIM27P14373 513 aa31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 TEPSINQ96N21 525 aa31.25■■■□□ 2.59
TM7SF3-207ENST00000539399 MANSC4A6NHS7 340 aaPredicted RBP31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 UNCXA6NJT0 531 aa31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 GNAI3P08754 354 aa31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 NOM1Q5C9Z4 860 aaKnown RBP31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 ATG9AQ7Z3C6 839 aa31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 CFHR5Q9BXR6 569 aa31.24■■■□□ 2.59
TM7SF3-207ENST00000539399 TNRC18O15417 2968 aaPredicted RBP31.23■■■□□ 2.59
TM7SF3-207ENST00000539399 HDLBPQ00341 1268 aaKnown RBP31.23■■■□□ 2.59
TM7SF3-207ENST00000539399 TMEM39BQ9GZU3 492 aa31.23■■■□□ 2.59
TM7SF3-207ENST00000539399 GJA5P36382 358 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 ZKSCAN2Q63HK3 967 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 IFNL1Q8IU54 200 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 ANKRD13AQ8IZ07 590 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 TEKT1Q969V4 418 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 MEIS3Q99687 375 aa31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 LRRFIP2Q9Y608 721 aaKnown RBP31.22■■■□□ 2.59
TM7SF3-207ENST00000539399 SLC5A1P13866 664 aa31.21■■■□□ 2.59
TM7SF3-207ENST00000539399 INHBEP58166 350 aa31.21■■■□□ 2.59
TM7SF3-207ENST00000539399 SIL1Q9H173 461 aa31.21■■■□□ 2.59
TM7SF3-207ENST00000539399 IGF2BP3O00425 579 aaKnown RBP eCLIP31.2■■■□□ 2.59
TM7SF3-207ENST00000539399 ALDH1A1P00352 501 aa31.2■■■□□ 2.59
TM7SF3-207ENST00000539399 CACNB3P54284 484 aa31.2■■■□□ 2.59
TM7SF3-207ENST00000539399 LPIN2Q92539 896 aa31.2■■■□□ 2.59
TM7SF3-207ENST00000539399 TNNI2P48788 182 aa31.19■■■□□ 2.58
TM7SF3-207ENST00000539399 FBXO3Q9UK99 471 aa31.19■■■□□ 2.58
TM7SF3-207ENST00000539399 HPS5Q9UPZ3 1129 aa31.19■■■□□ 2.58
TM7SF3-207ENST00000539399 FKTNO75072 461 aa31.18■■■□□ 2.58
TM7SF3-207ENST00000539399 SOX10P56693 466 aa31.18■■■□□ 2.58
TM7SF3-207ENST00000539399 ZDHHC15Q96MV8 337 aa31.18■■■□□ 2.58
TM7SF3-207ENST00000539399 ELP3Q9H9T3 547 aa31.18■■■□□ 2.58
TM7SF3-207ENST00000539399 PKN2Q16513 984 aaKnown RBP31.17■■■□□ 2.58
TM7SF3-207ENST00000539399 CLUAP1Q96AJ1 413 aa31.17■■■□□ 2.58
TM7SF3-207ENST00000539399 SUGT1Q9Y2Z0 365 aa31.17■■■□□ 2.58
TM7SF3-207ENST00000539399 CIAO1O76071 339 aa31.16■■■□□ 2.58
TM7SF3-207ENST00000539399 MRIQ9BWK5 157 aa31.16■■■□□ 2.58
TM7SF3-207ENST00000539399 MAST3O60307 1309 aa31.16■■■□□ 2.58
TM7SF3-207ENST00000539399 ATP2B3Q16720 1220 aa31.15■■■□□ 2.58
TM7SF3-207ENST00000539399 APOBEC3HQ6NTF7 200 aaKnown RBP31.15■■■□□ 2.58
TM7SF3-207ENST00000539399 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.15■■■□□ 2.58
TM7SF3-207ENST00000539399 OPTNQ96CV9 577 aa31.15■■■□□ 2.58
TM7SF3-207ENST00000539399 FTSJ3Q8IY81 847 aaKnown RBP31.14■■■□□ 2.58
TM7SF3-207ENST00000539399 WDR66Q8TBY9 1149 aa31.14■■■□□ 2.58
TM7SF3-207ENST00000539399 CEP126Q9P2H0 1117 aa31.14■■■□□ 2.58
TM7SF3-207ENST00000539399 PA2G4Q9UQ80 394 aaKnown RBP31.14■■■□□ 2.58
TM7SF3-207ENST00000539399 VGLL4Q14135 290 aa31.13■■■□□ 2.57
TM7SF3-207ENST00000539399 CNKSR2Q8WXI2 1034 aa31.13■■■□□ 2.57
TM7SF3-207ENST00000539399 TMOD2Q9NZR1 351 aa31.13■■■□□ 2.57
TM7SF3-207ENST00000539399 TNNQ9UQP3 1299 aa31.13■■■□□ 2.57
TM7SF3-207ENST00000539399 HHIPL2Q6UWX4 724 aa31.12■■■□□ 2.57
TM7SF3-207ENST00000539399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.12■■■□□ 2.57
TM7SF3-207ENST00000539399 PTPN18Q99952 460 aa31.12■■■□□ 2.57
TM7SF3-207ENST00000539399 AK9Q5TCS8 1911 aa31.12■■■□□ 2.57
TM7SF3-207ENST00000539399 GNAI2P04899 355 aa31.11■■■□□ 2.57
TM7SF3-207ENST00000539399 MAP3K9P80192 1104 aa31.11■■■□□ 2.57
TM7SF3-207ENST00000539399 TESPA1A2RU30 521 aaPredicted RBP31.1■■■□□ 2.57
TM7SF3-207ENST00000539399 FBXO46Q6PJ61 603 aaPredicted RBP31.1■■■□□ 2.57
TM7SF3-207ENST00000539399 FAM83AQ86UY5 434 aa31.1■■■□□ 2.57
TM7SF3-207ENST00000539399 TMEM57Q8N5G2 664 aa31.1■■■□□ 2.57
TM7SF3-207ENST00000539399 PDE4DIPQ5VU43 2346 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 MYH2Q9UKX2 1941 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 IL15P40933 162 aaPredicted RBP31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 CRHR2Q13324 411 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 MTX1Q13505 466 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 FKBP1CQ5VVH2 108 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 MS4A4AQ96JQ5 239 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 COPRSQ9NQ92 184 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 HTTP42858 3142 aa31.09■■■□□ 2.57
TM7SF3-207ENST00000539399 SRGAP3O43295 1099 aa31.08■■■□□ 2.57
TM7SF3-207ENST00000539399 PRDX5P30044 214 aa31.08■■■□□ 2.57
TM7SF3-207ENST00000539399 DIXDC1Q155Q3 683 aa31.08■■■□□ 2.57
TM7SF3-207ENST00000539399 OTUD7BQ6GQQ9 843 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms