RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.44■■■□□ 2.14
TMEM260-202ENST00000538838 NSUN4Q96CB9 384 aaKnown RBP28.43■■■□□ 2.14
TMEM260-202ENST00000538838 SUGT1Q9Y2Z0 365 aa28.43■■■□□ 2.14
TMEM260-202ENST00000538838 PDE6AP16499 860 aa28.43■■■□□ 2.14
TMEM260-202ENST00000538838 SLC9C2Q5TAH2 1124 aa28.43■■■□□ 2.14
TMEM260-202ENST00000538838 MAGEB6Q8N7X4 407 aa28.43■■■□□ 2.14
TMEM260-202ENST00000538838 GMLQ99445 158 aa28.43■■■□□ 2.14
TMEM260-202ENST00000538838 TTF2Q9UNY4 1162 aaKnown RBP28.43■■■□□ 2.14
TMEM260-202ENST00000538838 ZC3H4Q9UPT8 1303 aaKnown RBP28.43■■■□□ 2.14
TMEM260-202ENST00000538838 ADD2P35612 726 aa28.41■■■□□ 2.14
TMEM260-202ENST00000538838 GPC2Q8N158 579 aa28.41■■■□□ 2.14
TMEM260-202ENST00000538838 AGBL3Q8NEM8 1001 aa28.41■■■□□ 2.14
TMEM260-202ENST00000538838 ZNF532Q9HCE3 1301 aa28.4■■■□□ 2.14
TMEM260-202ENST00000538838 RNF113AO15541 343 aaKnown RBP28.4■■■□□ 2.14
TMEM260-202ENST00000538838 GMPSP49915 693 aaPredicted RBP28.4■■■□□ 2.14
TMEM260-202ENST00000538838 SCNN1DP51172 638 aa28.4■■■□□ 2.14
TMEM260-202ENST00000538838 DIXDC1Q155Q3 683 aa28.4■■■□□ 2.14
TMEM260-202ENST00000538838 NAA16Q6N069 864 aaPredicted RBP28.4■■■□□ 2.14
TMEM260-202ENST00000538838 ZSCAN25Q6NSZ9 544 aa28.4■■■□□ 2.14
TMEM260-202ENST00000538838 TCRBV5S4A2TA0A5A2 114 aa28.4■■■□□ 2.14
TMEM260-202ENST00000538838 MAST3O60307 1309 aa28.39■■■□□ 2.14
TMEM260-202ENST00000538838 DDNO94850 711 aaPredicted RBP28.39■■■□□ 2.13
TMEM260-202ENST00000538838 ZFYP08048 801 aaPredicted RBP28.39■■■□□ 2.13
TMEM260-202ENST00000538838 LRRFIP1Q32MZ4 808 aaKnown RBP28.39■■■□□ 2.13
TMEM260-202ENST00000538838 ADGRA1Q86SQ6 560 aa28.39■■■□□ 2.13
TMEM260-202ENST00000538838 DIAPH3Q9NSV4 1193 aa28.39■■■□□ 2.13
TMEM260-202ENST00000538838 CDC45O75419 566 aa28.38■■■□□ 2.13
TMEM260-202ENST00000538838 CYP7A1P22680 504 aa28.38■■■□□ 2.13
TMEM260-202ENST00000538838 RPS12P25398 132 aaKnown RBP28.38■■■□□ 2.13
TMEM260-202ENST00000538838 CHMLP26374 656 aa28.37■■■□□ 2.13
TMEM260-202ENST00000538838 FAM227BQ96M60 508 aa28.37■■■□□ 2.13
TMEM260-202ENST00000538838 SHTN1A0MZ66 631 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 NMIQ13287 307 aaPredicted RBP28.36■■■□□ 2.13
TMEM260-202ENST00000538838 UBE3CQ15386 1083 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 A0A0D9SFI3 127 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 HIP1O00291 1037 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 IGSF3O75054 1194 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 GSTO1P78417 241 aa28.36■■■□□ 2.13
TMEM260-202ENST00000538838 MROH7-TTC4A0A0A0MT08 1334 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 USP17L8P0C7I0 530 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 ZMYM1Q5SVZ6 1142 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 TICAM2Q86XR7 235 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 APPBP2Q92624 585 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 ECM29Q5VYK3 1845 aa28.35■■■□□ 2.13
TMEM260-202ENST00000538838 CRKP46108 304 aa28.34■■■□□ 2.13
TMEM260-202ENST00000538838 DPY19L2Q6NUT2 758 aa28.34■■■□□ 2.13
TMEM260-202ENST00000538838 CWC27Q6UX04 472 aaKnown RBP28.34■■■□□ 2.13
TMEM260-202ENST00000538838 DPF2Q92785 391 aa28.34■■■□□ 2.13
TMEM260-202ENST00000538838 SEC62Q99442 399 aaKnown RBP28.34■■■□□ 2.13
TMEM260-202ENST00000538838 MICALL2Q8IY33 904 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 OGFOD1Q8N543 542 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 MIGA1Q8NAN2 632 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 OSBP2Q969R2 916 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 TEKT1Q969V4 418 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 HDAC9Q9UKV0 1011 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 DAGLAQ9Y4D2 1042 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 PCDHAC2Q9Y5I4 1007 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 CDK5RAP2Q96SN8 1893 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 GAKO14976 1311 aa28.33■■■□□ 2.13
TMEM260-202ENST00000538838 GLTPD2A6NH11 291 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 TMED8Q6PL24 325 aaPredicted RBP28.32■■■□□ 2.12
TMEM260-202ENST00000538838 SLF2Q8IX21 1173 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 PUS7LQ9H0K6 701 aaKnown RBP28.32■■■□□ 2.12
TMEM260-202ENST00000538838 SERPINA10Q9UK55 444 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 WDR90Q96KV7 1748 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 M0R2C6 588 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 LDHCP07864 332 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 HDLBPQ00341 1268 aaKnown RBP28.32■■■□□ 2.12
TMEM260-202ENST00000538838 IL25Q9H293 177 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 GPRC5DQ9NZD1 345 aa28.32■■■□□ 2.12
TMEM260-202ENST00000538838 CNOT7Q9UIV1 285 aaKnown RBP28.32■■■□□ 2.12
TMEM260-202ENST00000538838 HHIPL2Q6UWX4 724 aa28.31■■■□□ 2.12
TMEM260-202ENST00000538838 RBM5P52756 815 aaKnown RBP eCLIP28.3■■■□□ 2.12
TMEM260-202ENST00000538838 ZNF280AP59817 542 aaPredicted RBP28.3■■■□□ 2.12
TMEM260-202ENST00000538838 CFAP100Q494V2 611 aa28.3■■■□□ 2.12
TMEM260-202ENST00000538838 CASC1Q6TDU7 716 aa28.3■■■□□ 2.12
TMEM260-202ENST00000538838 CCDC129Q6ZRS4 1044 aa28.3■■■□□ 2.12
TMEM260-202ENST00000538838 FAM163AQ96GL9 167 aaPredicted RBP28.3■■■□□ 2.12
TMEM260-202ENST00000538838 AATFQ9NY61 560 aaKnown RBP eCLIP28.3■■■□□ 2.12
TMEM260-202ENST00000538838 SCN4AP35499 1836 aa28.3■■■□□ 2.12
TMEM260-202ENST00000538838 BTDP43251 543 aa28.29■■■□□ 2.12
TMEM260-202ENST00000538838 MRIQ9BWK5 157 aa28.29■■■□□ 2.12
TMEM260-202ENST00000538838 HELLSQ9NRZ9 838 aa28.29■■■□□ 2.12
TMEM260-202ENST00000538838 DYNLL1P63167 89 aaKnown RBP28.29■■■□□ 2.12
TMEM260-202ENST00000538838 L3MBTL3Q96JM7 780 aaPredicted RBP28.29■■■□□ 2.12
TMEM260-202ENST00000538838 ZDHHC15Q96MV8 337 aa28.29■■■□□ 2.12
TMEM260-202ENST00000538838 MYOZ2Q9NPC6 264 aa28.29■■■□□ 2.12
TMEM260-202ENST00000538838 FOCADQ5VW36 1801 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 MAGEB6P1A0A0J9YX57 407 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 MBD4O95243 580 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 C8orf34Q49A92 452 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 MCMDC2Q4G0Z9 681 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 ZNF589Q86UQ0 364 aaPredicted RBP28.28■■■□□ 2.12
TMEM260-202ENST00000538838 RUFY2Q8WXA3 655 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 ESYT1Q9BSJ8 1104 aa28.28■■■□□ 2.12
TMEM260-202ENST00000538838 GPR75-ASB3A0A0A6YYF3 556 aa28.27■■■□□ 2.12
TMEM260-202ENST00000538838 EGFRP00533 1210 aa28.27■■■□□ 2.12
TMEM260-202ENST00000538838 EPS15P42566 896 aa28.27■■■□□ 2.12
TMEM260-202ENST00000538838 LCORLQ8N3X6 602 aa28.27■■■□□ 2.12
TMEM260-202ENST00000538838 AIDAQ96BJ3 306 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms