RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ARMC9Q7Z3E5 817 aa18.64■□□□□ 0.57
RAB40B-202ENST00000538809 TDRD3Q9H7E2 651 aaKnown RBP18.64■□□□□ 0.57
RAB40B-202ENST00000538809 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
RAB40B-202ENST00000538809 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
RAB40B-202ENST00000538809 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
RAB40B-202ENST00000538809 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
RAB40B-202ENST00000538809 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
RAB40B-202ENST00000538809 CSRNP1Q96S65 589 aa18.63■□□□□ 0.57
RAB40B-202ENST00000538809 CEP126Q9P2H0 1117 aa18.63■□□□□ 0.57
RAB40B-202ENST00000538809 ZNF70Q9UC06 446 aaPredicted RBP18.63■□□□□ 0.57
RAB40B-202ENST00000538809 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
RAB40B-202ENST00000538809 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
RAB40B-202ENST00000538809 IL15P40933 162 aaPredicted RBP18.62■□□□□ 0.57
RAB40B-202ENST00000538809 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
RAB40B-202ENST00000538809 COPRSQ9NQ92 184 aa18.62■□□□□ 0.57
RAB40B-202ENST00000538809 TRPA1O75762 1119 aa18.61■□□□□ 0.57
RAB40B-202ENST00000538809 MTX1Q13505 466 aa18.61■□□□□ 0.57
RAB40B-202ENST00000538809 RASA3Q14644 834 aa18.61■□□□□ 0.57
RAB40B-202ENST00000538809 NBPF12Q5TAG4 269 aaPredicted RBP18.61■□□□□ 0.57
RAB40B-202ENST00000538809 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
RAB40B-202ENST00000538809 RNF186Q9NXI6 227 aa18.61■□□□□ 0.57
RAB40B-202ENST00000538809 TCP10L2B9ZVM9 353 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 ADORA1P30542 326 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 CDAN1Q8IWY9 1227 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 TEKT1Q969V4 418 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 SAGE1Q9NXZ1 904 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 DOCK2Q92608 1830 aa18.6■□□□□ 0.57
RAB40B-202ENST00000538809 MYO5AQ9Y4I1 1855 aaKnown RBP18.59■□□□□ 0.57
RAB40B-202ENST00000538809 MAST3O60307 1309 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 PHKA1P46020 1223 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 CACNB3P54284 484 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 LDLRAD1Q5T700 205 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
RAB40B-202ENST00000538809 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
RAB40B-202ENST00000538809 GNAI2P04899 355 aa18.58■□□□□ 0.56
RAB40B-202ENST00000538809 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
RAB40B-202ENST00000538809 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 HDLBPQ00341 1268 aaKnown RBP18.57■□□□□ 0.56
RAB40B-202ENST00000538809 TFCP2Q12800 502 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 MAP3K11Q16584 847 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 WDR66Q8TBY9 1149 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 ABHD8Q96I13 439 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 TMEM39BQ9GZU3 492 aa18.57■□□□□ 0.56
RAB40B-202ENST00000538809 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.57■□□□□ 0.56
RAB40B-202ENST00000538809 RLBP1P12271 317 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 PRDX5P30044 214 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
RAB40B-202ENST00000538809 REM2Q8IYK8 340 aaPredicted RBP18.56■□□□□ 0.56
RAB40B-202ENST00000538809 ZDHHC15Q96MV8 337 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 TEPSINQ96N21 525 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 GNL3LQ9NVN8 582 aaKnown RBP18.56■□□□□ 0.56
RAB40B-202ENST00000538809 SUGT1Q9Y2Z0 365 aa18.56■□□□□ 0.56
RAB40B-202ENST00000538809 TNNI2P48788 182 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 TIMM10P62072 90 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 DIXDC1Q155Q3 683 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 CCDC102BQ68D86 513 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 WNK4Q96J92 1243 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 C1orf115Q9H7X2 142 aa18.55■□□□□ 0.56
RAB40B-202ENST00000538809 A0A1B0GUL7 405 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 USP2O75604 605 aaPredicted RBP18.54■□□□□ 0.56
RAB40B-202ENST00000538809 IREB2P48200 963 aaKnown RBP18.54■□□□□ 0.56
RAB40B-202ENST00000538809 APOBEC3HQ6NTF7 200 aaKnown RBP18.54■□□□□ 0.56
RAB40B-202ENST00000538809 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 SLC10A4Q96EP9 437 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 MCOLN1Q9GZU1 580 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 DENND2AQ9ULE3 1009 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 MAST2Q6P0Q8 1798 aa18.54■□□□□ 0.56
RAB40B-202ENST00000538809 ZBTB22O15209 634 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 SREBF2Q12772 1141 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 DGKZQ13574 1117 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 HHIPL2Q6UWX4 724 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 DAGLAQ9Y4D2 1042 aa18.53■□□□□ 0.56
RAB40B-202ENST00000538809 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 SEMA3EO15041 775 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 TBC1D8O95759 1140 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 LDHBP07195 334 aaKnown RBP18.52■□□□□ 0.56
RAB40B-202ENST00000538809 GJA5P36382 358 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 TM4SF4P48230 202 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 MRIQ9BWK5 157 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.56
RAB40B-202ENST00000538809 ZBTB7BO15156 539 aaPredicted RBP18.51■□□□□ 0.55
RAB40B-202ENST00000538809 ANKRD13AQ8IZ07 590 aa18.51■□□□□ 0.55
RAB40B-202ENST00000538809 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
RAB40B-202ENST00000538809 ELP3Q9H9T3 547 aa18.51■□□□□ 0.55
RAB40B-202ENST00000538809 ZBTB48P10074 688 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-202ENST00000538809 G3BP1Q13283 466 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB40B-202ENST00000538809 POLA2Q14181 598 aa18.5■□□□□ 0.55
RAB40B-202ENST00000538809 MVPQ14764 893 aaKnown RBP18.5■□□□□ 0.55
RAB40B-202ENST00000538809 RPAP1Q9BWH6 1393 aaPredicted RBP18.5■□□□□ 0.55
RAB40B-202ENST00000538809 MANSC4A6NHS7 340 aaPredicted RBP18.49■□□□□ 0.55
RAB40B-202ENST00000538809 CCDC85CA6NKD9 419 aa18.49■□□□□ 0.55
RAB40B-202ENST00000538809 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
RAB40B-202ENST00000538809 FAM83AQ86UY5 434 aa18.49■□□□□ 0.55
RAB40B-202ENST00000538809 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms