RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 FBXO3Q9UK99 471 aa10.83□□□□□ -0.68
DDB1-212ENST00000538470 CCER2I3L3R5 266 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 GPR25O00155 361 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 EYA2O00167 538 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 FRAT2O75474 233 aaPredicted RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 TBC1D8O95759 1140 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 UBTFL1P0CB47 393 aaPredicted RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 FGFR2P21802 821 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 CRKP46108 304 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 MKRN3Q13064 507 aaKnown RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 NBPF12Q5TAG4 269 aaPredicted RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 ANKRD13AQ8IZ07 590 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 API5Q9BZZ5 524 aaKnown RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 RBBP6Q7Z6E9 1792 aaKnown RBP10.82□□□□□ -0.68
DDB1-212ENST00000538470 AOX1Q06278 1338 aa10.82□□□□□ -0.68
DDB1-212ENST00000538470 DOCK2Q92608 1830 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 FKTNO75072 461 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 CIAO1O76071 339 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 SLC5A1P13866 664 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
DDB1-212ENST00000538470 CHAF1AQ13111 956 aaPredicted RBP10.81□□□□□ -0.68
DDB1-212ENST00000538470 FKBP1CQ5VVH2 108 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 LPIN2Q92539 896 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 TEKT1Q969V4 418 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 TDRD3Q9H7E2 651 aaKnown RBP10.81□□□□□ -0.68
DDB1-212ENST00000538470 TMOD2Q9NZR1 351 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 FZD1Q9UP38 647 aa10.81□□□□□ -0.68
DDB1-212ENST00000538470 ZBTB22O15209 634 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 USP2O75604 605 aaPredicted RBP10.8□□□□□ -0.68
DDB1-212ENST00000538470 OTUD7BQ6GQQ9 843 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 KLHDC4Q8TBB5 520 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 HOOK2Q96ED9 719 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 ZDHHC15Q96MV8 337 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 TEPSINQ96N21 525 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 HPS5Q9UPZ3 1129 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 AK9Q5TCS8 1911 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 MYH2Q9UKX2 1941 aa10.8□□□□□ -0.68
DDB1-212ENST00000538470 BCAMP50895 628 aa10.79□□□□□ -0.68
DDB1-212ENST00000538470 GRIK5Q16478 980 aa10.79□□□□□ -0.68
DDB1-212ENST00000538470 FBXO46Q6PJ61 603 aaPredicted RBP10.79□□□□□ -0.68
DDB1-212ENST00000538470 FAM83AQ86UY5 434 aa10.79□□□□□ -0.68
DDB1-212ENST00000538470 WDR66Q8TBY9 1149 aa10.79□□□□□ -0.68
DDB1-212ENST00000538470 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
DDB1-212ENST00000538470 TESPA1A2RU30 521 aaPredicted RBP10.78□□□□□ -0.68
DDB1-212ENST00000538470 TCP10L2B9ZVM9 353 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 IGF2BP3O00425 579 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDB1-212ENST00000538470 SEMA3EO15041 775 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 IL15P40933 162 aaPredicted RBP10.78□□□□□ -0.68
DDB1-212ENST00000538470 HHIPL2Q6UWX4 724 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.78□□□□□ -0.683e-20■□□□□ 9.2
DDB1-212ENST00000538470 ARHGAP45Q92619 1136 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 OPTNQ96CV9 577 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 TMEM39BQ9GZU3 492 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 NOB1Q9ULX3 412 aaKnown RBP10.78□□□□□ -0.68
DDB1-212ENST00000538470 CSADQ9Y600 493 aa10.78□□□□□ -0.68
DDB1-212ENST00000538470 TNRC18O15417 2968 aaPredicted RBP10.77□□□□□ -0.69
DDB1-212ENST00000538470 GJA5P36382 358 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 RARSP54136 660 aaKnown RBP10.77□□□□□ -0.69
DDB1-212ENST00000538470 SOX10P56693 466 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 MAP3K9P80192 1104 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 VGLL4Q14135 290 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.77□□□□□ -0.69
DDB1-212ENST00000538470 ERO1AQ96HE7 468 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 ELP3Q9H9T3 547 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.69
DDB1-212ENST00000538470 CEP126Q9P2H0 1117 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 SALL1Q9NSC2 1324 aa10.77□□□□□ -0.69
DDB1-212ENST00000538470 MAST2Q6P0Q8 1798 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 GTF2A2P52657 109 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 CRHR2Q13324 411 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 DCAF15Q66K64 600 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
DDB1-212ENST00000538470 CDAN1Q8IWY9 1227 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 ZGPATQ8N5A5 531 aaKnown RBP10.76□□□□□ -0.69
DDB1-212ENST00000538470 R3HDMLQ9H3Y0 253 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 ZCCHC17Q9NP64 241 aaKnown RBP10.76□□□□□ -0.69
DDB1-212ENST00000538470 COPRSQ9NQ92 184 aa10.76□□□□□ -0.69
DDB1-212ENST00000538470 LRRFIP2Q9Y608 721 aaKnown RBP10.76□□□□□ -0.69
DDB1-212ENST00000538470 PDS5AQ29RF7 1337 aaKnown RBP10.76□□□□□ -0.69
DDB1-212ENST00000538470 DOCK1Q14185 1865 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 GNAI3P08754 354 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 MTX1Q13505 466 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
DDB1-212ENST00000538470 OTOP1Q7RTM1 612 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 MEIS3Q99687 375 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 SIL1Q9H173 461 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
DDB1-212ENST00000538470 DENND2AQ9ULE3 1009 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 DAGLAQ9Y4D2 1042 aa10.75□□□□□ -0.69
DDB1-212ENST00000538470 PTPRFP10586 1907 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms