RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CYP7A1P22680 504 aa12.81□□□□□ -0.36
TNFRSF1A-211ENST00000538363 AIDAQ96BJ3 306 aa12.81□□□□□ -0.36
TNFRSF1A-211ENST00000538363 HELLSQ9NRZ9 838 aa12.81□□□□□ -0.36
TNFRSF1A-211ENST00000538363 APPP05067 770 aa12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MFSD14BQ5SR56 506 aa12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-211ENST00000538363 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PDE6AP16499 860 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 APPBP2Q92624 585 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 DDRGK1Q96HY6 314 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 RAD50Q92878 1312 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ZNF532Q9HCE3 1301 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MAGEB6P1A0A0J9YX57 407 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 BAG3O95817 575 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ADD2P35612 726 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 UBE3CQ15386 1083 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MAST3O60307 1309 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 CHD4Q14839 1912 aa12.78□□□□□ -0.36
TNFRSF1A-211ENST00000538363 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SGSM2O43147 1006 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 IGSF3O75054 1194 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RAD17O75943 681 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SEC24BO95487 1268 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TNIP1Q15025 636 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TMED8Q6PL24 325 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 HDAC9Q9UKV0 1011 aa12.77□□□□□ -0.37
TNFRSF1A-211ENST00000538363 AKAP11Q9UKA4 1901 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 YY1P25490 414 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RASSF7Q02833 373 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MECOMQ03112 1051 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 STRIP1Q5VSL9 837 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CCDC129Q6ZRS4 1044 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MIGA1Q8NAN2 632 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 FAM205AQ6ZU69 1335 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SALL1Q9NSC2 1324 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SBF1O95248 1867 aa12.76□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MBD4O95243 580 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MYH7P12883 1935 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 GNAT2P19087 354 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PRDX5P30044 214 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CIAPIN1Q6FI81 312 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MYO3BQ8WXR4 1341 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 M0R2C6 588 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 GPAA1O43292 621 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PLCG2P16885 1265 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 LMNB1P20700 586 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 USP5P45974 858 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 NSUN4Q96CB9 384 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 USP26Q9BXU7 913 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 ARMT1Q9H993 441 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TSHZ2Q9NRE2 1034 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
TNFRSF1A-211ENST00000538363 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 NFKBIEO00221 500 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CHGBP05060 677 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TDO2P48775 406 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 SCNN1DP51172 638 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 FKBP1AP62942 108 aaKnown RBP12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 CERS3Q8IU89 383 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 TEKT1Q969V4 418 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
TNFRSF1A-211ENST00000538363 KCNQ5Q9NR82 932 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms