RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PPEF1O14829 653 aaPredicted RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 ZBED4O75132 1171 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 IRX3P78415 501 aaPredicted RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 GADL1Q6ZQY3 521 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 PAGR1Q9BTK6 254 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 DCTPP1Q9H773 170 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 WDR70Q9NW82 654 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 RMND1Q9NWS8 449 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 RBM27Q9P2N5 1060 aaKnown RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 CSADQ9Y600 493 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 NEURL1BA8MQ27 555 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 ZSCAN22P10073 491 aaPredicted RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 CALML3P27482 149 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 ZAP70P43403 619 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CLIP2Q9UDT6 1046 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CNPY2Q9Y2B0 182 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 ERVK-7P63135 1459 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CHL1O00533 1208 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 SFPQP23246 707 aaKnown RBP eCLIP6.11□□□□□ -1.43
LRP6-203ENST00000538239 GNA11P29992 359 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 MFSD14BQ5SR56 506 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 KRT79Q5XKE5 535 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 KIAA0825Q8IV33 1275 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 KIFC2Q96AC6 838 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 DDX19AQ9NUU7 478 aaKnown RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 PTPRTO14522 1441 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 HOXB7P09629 217 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CASQ1P31415 396 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 TMC6Q7Z403 805 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 RGS22Q8NE09 1264 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 TMCO5BA8MYB1 307 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 GPAA1O43292 621 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 HARSP12081 509 aaKnown RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 NOP2P46087 812 aaKnown RBP6.11□□□□□ -1.43
LRP6-203ENST00000538239 GYG1P46976 350 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 LETM2Q2VYF4 491 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 CCDC112Q8NEF3 446 aa6.11□□□□□ -1.43
LRP6-203ENST00000538239 ZNF532Q9HCE3 1301 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 NOP56O00567 594 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 PRPF4BQ13523 1007 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 TBC1D5Q92609 795 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 AK2P54819 239 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 TAF12Q16514 161 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 RUFY3Q7L099 469 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 TEKT1Q969V4 418 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 GINS2Q9Y248 185 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 MAGI2Q86UL8 1455 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 TRIM75PA6NK02 468 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 BMP15O95972 392 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 ZRSR2Q15696 482 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 USP48Q86UV5 1035 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 PLEKHM2Q8IWE5 1019 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 IL17REQ8NFR9 667 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 ZBTB40Q9NUA8 1239 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 FAM135BQ49AJ0 1406 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 AFF2P51816 1311 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 SORBS3O60504 671 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 USO1O60763 962 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 CPA1P15085 419 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 ZNF174Q15697 407 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 FAM47AQ5JRC9 791 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 DHX32Q7L7V1 743 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 CCNT1O60563 726 aaKnown RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 ATP2B4P23634 1241 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 ZBTB7BO15156 539 aaPredicted RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 KIF5CO60282 957 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 GIGYF1O75420 1035 aaPredicted RBP6.1□□□□□ -1.43
LRP6-203ENST00000538239 CHMLP26374 656 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 CNKSR1Q969H4 720 aa6.1□□□□□ -1.43
LRP6-203ENST00000538239 ARAP3Q8WWN8 1544 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 SLC1A4P43007 532 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 USP37Q86T82 979 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 FAM227BQ96M60 508 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 PNMA6EA0A0J9YXQ4 647 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 BCAMP50895 628 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 BRDTQ58F21 947 aaPredicted RBP6.09□□□□□ -1.43
LRP6-203ENST00000538239 MAEAQ7L5Y9 396 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 SULF1Q8IWU6 871 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 KCNG4Q8TDN1 519 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 OTUD7AQ8TE49 926 aaPredicted RBP6.09□□□□□ -1.43
LRP6-203ENST00000538239 COMMD10Q9Y6G5 202 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 SERPINB2P05120 415 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 NSMFQ6X4W1 530 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 DTHD1Q6ZMT9 781 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 ZBTB38Q8NAP3 1195 aaPredicted RBP6.09□□□□□ -1.43
LRP6-203ENST00000538239 TBC1D22AQ8WUA7 517 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 APPBP2Q92624 585 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 IMPG2Q9BZV3 1241 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 MAP3K15Q6ZN16 1313 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 GSTTP1A0A1W2PQM5 241 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 PER1O15534 1290 aaPredicted RBP6.09□□□□□ -1.43
LRP6-203ENST00000538239 LMAN1P49257 510 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 BRINP3Q76B58 766 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 TBC1D32Q96NH3 1257 aa6.09□□□□□ -1.43
LRP6-203ENST00000538239 CNGA1P29973 690 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms