RNA–Protein interactions for RNA: ENST00000538065.5

ATXN7-213, Transcript of ataxin 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN7, Length 6,842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN7-213ENST00000538065 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
ATXN7-213ENST00000538065 PYM1Q9BRP8 204 aaKnown RBP18.31■□□□□ 0.52
ATXN7-213ENST00000538065 BRDTQ58F21 947 aaPredicted RBP18.31■□□□□ 0.52
ATXN7-213ENST00000538065 ERCC4Q92889 916 aaPredicted RBP18.31■□□□□ 0.52
ATXN7-213ENST00000538065 TEX35Q5T0J7 233 aa18.31■□□□□ 0.52
ATXN7-213ENST00000538065 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
ATXN7-213ENST00000538065 TMX3Q96JJ7 454 aa18.31■□□□□ 0.52
ATXN7-213ENST00000538065 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
ATXN7-213ENST00000538065 NOP56O00567 594 aaKnown RBP18.3■□□□□ 0.52
ATXN7-213ENST00000538065 GPAA1O43292 621 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 FAM13AO94988 1023 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 TNFAIP1Q13829 316 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
ATXN7-213ENST00000538065 TRIM47Q96LD4 638 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 KIF22Q14807 665 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 SYNCQ9H7C4 482 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 ZNF354CQ86Y25 554 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 UIMC1Q96RL1 719 aa18.3■□□□□ 0.52
ATXN7-213ENST00000538065 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
ATXN7-213ENST00000538065 DDX39AO00148 427 aaKnown RBP18.29■□□□□ 0.52
ATXN7-213ENST00000538065 SLC1A4P43007 532 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 WDR70Q9NW82 654 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 ASIC1P78348 528 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 ZBTB7AO95365 584 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 RRAGBQ5VZM2 374 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
ATXN7-213ENST00000538065 ZBTB40Q9NUA8 1239 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 TOP1P11387 765 aaKnown RBP18.29■□□□□ 0.52
ATXN7-213ENST00000538065 SYKP43405 635 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
ATXN7-213ENST00000538065 BCAMP50895 628 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
ATXN7-213ENST00000538065 KRT13P13646 458 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 CNGA1P29973 690 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 KANK3Q6NY19 840 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 CTNNA2P26232 953 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 TAF12Q16514 161 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 ZSCAN16Q9H4T2 348 aaPredicted RBP18.28■□□□□ 0.52
ATXN7-213ENST00000538065 LETM2Q2VYF4 491 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 DBNDD1Q9H9R9 158 aa18.28■□□□□ 0.52
ATXN7-213ENST00000538065 PNMA6EA0A0J9YXQ4 647 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 CHRNDQ07001 517 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 DALRD3Q5D0E6 543 aaKnown RBP18.27■□□□□ 0.52
ATXN7-213ENST00000538065 CTAGE5O15320 804 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 HARSP12081 509 aaKnown RBP18.27■□□□□ 0.52
ATXN7-213ENST00000538065 APPBP2Q92624 585 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
ATXN7-213ENST00000538065 FAM114A1Q8IWE2 563 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 DHX58Q96C10 678 aa18.27■□□□□ 0.52
ATXN7-213ENST00000538065 DHX32Q7L7V1 743 aaKnown RBP18.27■□□□□ 0.51
ATXN7-213ENST00000538065 USP6P35125 1406 aa18.27■□□□□ 0.51
ATXN7-213ENST00000538065 SETD1BQ9UPS6 1966 aaKnown RBP18.27■□□□□ 0.51
ATXN7-213ENST00000538065 THRAP3Q9Y2W1 955 aaKnown RBP18.26■□□□□ 0.51
ATXN7-213ENST00000538065 TRIM75PA6NK02 468 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 FAM47AQ5JRC9 791 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 AS3MTQ9HBK9 375 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
ATXN7-213ENST00000538065 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
ATXN7-213ENST00000538065 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 TMX1Q9H3N1 280 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 BMP15O95972 392 aa18.26■□□□□ 0.51
ATXN7-213ENST00000538065 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
ATXN7-213ENST00000538065 GREM2Q9H772 168 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 CERS3Q8IU89 383 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 GOLGA6L10A6NI86 522 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
ATXN7-213ENST00000538065 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 RMND1Q9NWS8 449 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 CHMLP26374 656 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
ATXN7-213ENST00000538065 HSP90AA4PQ58FG1 418 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 ABCC3O15438 1527 aa18.25■□□□□ 0.51
ATXN7-213ENST00000538065 RAD17O75943 681 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 FAM193AP78312 1265 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 FAM227BQ96M60 508 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 HSPA1LP34931 641 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 EN1Q05925 392 aaPredicted RBP18.24■□□□□ 0.51
ATXN7-213ENST00000538065 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 ZNF771Q7L3S4 317 aaPredicted RBP18.24■□□□□ 0.51
ATXN7-213ENST00000538065 PSDA5PKW4 1024 aaPredicted RBP18.24■□□□□ 0.51
ATXN7-213ENST00000538065 CPA1P15085 419 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 USP37Q86T82 979 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
ATXN7-213ENST00000538065 PIGBQ92521 554 aa18.24■□□□□ 0.51
ATXN7-213ENST00000538065 SORBS3O60504 671 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms