RNA–Protein interactions for RNA: ENST00000538020.1

LMO3-218, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-218ENST00000538020 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
LMO3-218ENST00000538020 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
LMO3-218ENST00000538020 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 A0A0D9SFI3 127 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 SGSM2O43147 1006 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 LDHCP07864 332 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 CYP7A1P22680 504 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 MECOMQ03112 1051 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 MCMDC2Q4G0Z9 681 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 DACT2Q5SW24 774 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 NSUN4Q96CB9 384 aaKnown RBP14.41□□□□□ -0.1
LMO3-218ENST00000538020 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
LMO3-218ENST00000538020 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
LMO3-218ENST00000538020 TCRBV5S4A2TA0A5A2 114 aa14.4□□□□□ -0.1
LMO3-218ENST00000538020 EIF6P56537 245 aaKnown RBP14.4□□□□□ -0.1
LMO3-218ENST00000538020 TNIP1Q15025 636 aa14.4□□□□□ -0.1
LMO3-218ENST00000538020 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
LMO3-218ENST00000538020 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
LMO3-218ENST00000538020 SBF1O95248 1867 aa14.4□□□□□ -0.1
LMO3-218ENST00000538020 FZD9O00144 591 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 RAD17O75943 681 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 VIL1P09327 827 aaKnown RBP14.39□□□□□ -0.11
LMO3-218ENST00000538020 RSBN1LQ6PCB5 846 aaPredicted RBP14.39□□□□□ -0.11
LMO3-218ENST00000538020 CERS3Q8IU89 383 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 OSBP2Q969R2 916 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 AIDAQ96BJ3 306 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
LMO3-218ENST00000538020 KCNQ5Q9NR82 932 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 CCDC171Q6TFL3 1326 aa14.39□□□□□ -0.11
LMO3-218ENST00000538020 TIAM2Q8IVF5 1701 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 PSMD14O00487 310 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 EPB41L2O43491 1005 aaKnown RBP14.38□□□□□ -0.11
LMO3-218ENST00000538020 CHGBP05060 677 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 PRELPP51888 382 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 CXCL9Q07325 125 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 AGBL3Q8NEM8 1001 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 ANO2Q9NQ90 1003 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 TTF2Q9UNY4 1162 aaKnown RBP14.38□□□□□ -0.11
LMO3-218ENST00000538020 MROH7-TTC4A0A0A0MT08 1334 aa14.38□□□□□ -0.11
LMO3-218ENST00000538020 MYH2Q9UKX2 1941 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 M0R2C6 588 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 MMP14P50281 582 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 HDLBPQ00341 1268 aaKnown RBP14.37□□□□□ -0.11
LMO3-218ENST00000538020 GRIK5Q16478 980 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 SLFNL1Q499Z3 407 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
LMO3-218ENST00000538020 ZNF384Q8TF68 577 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
LMO3-218ENST00000538020 SEC62Q99442 399 aaKnown RBP14.37□□□□□ -0.11
LMO3-218ENST00000538020 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
LMO3-218ENST00000538020 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 HDAC9Q9UKV0 1011 aa14.37□□□□□ -0.11
LMO3-218ENST00000538020 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
LMO3-218ENST00000538020 GPAA1O43292 621 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 MBD4O95243 580 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 BAG3O95817 575 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 GNAT2P19087 354 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 RPS12P25398 132 aaKnown RBP14.36□□□□□ -0.11
LMO3-218ENST00000538020 KIAA0825Q8IV33 1275 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 TEKT1Q969V4 418 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 MXD3Q9BW11 206 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 IL25Q9H293 177 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 GAKO14976 1311 aa14.36□□□□□ -0.11
LMO3-218ENST00000538020 ZC3H4Q9UPT8 1303 aaKnown RBP14.36□□□□□ -0.11
LMO3-218ENST00000538020 SEC24BO95487 1268 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 PLCG2P16885 1265 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 DIXDC1Q155Q3 683 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 HHIPL2Q6UWX4 724 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 CCDC129Q6ZRS4 1044 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 ADGRA1Q86SQ6 560 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 OGFOD1Q8N543 542 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
LMO3-218ENST00000538020 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
LMO3-218ENST00000538020 MCCP23508 829 aa14.34□□□□□ -0.11
LMO3-218ENST00000538020 C9orf131Q5VYM1 1079 aa14.34□□□□□ -0.11
LMO3-218ENST00000538020 STRBPQ96SI9 672 aaKnown RBP14.34□□□□□ -0.11
LMO3-218ENST00000538020 GMLQ99445 158 aa14.34□□□□□ -0.11
LMO3-218ENST00000538020 RIOK1Q9BRS2 568 aaKnown RBP14.34□□□□□ -0.11
LMO3-218ENST00000538020 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
LMO3-218ENST00000538020 DAGLAQ9Y4D2 1042 aa14.34□□□□□ -0.11
LMO3-218ENST00000538020 GPR75-ASB3A0A0A6YYF3 556 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 USP17L8P0C7I0 530 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
LMO3-218ENST00000538020 BTDP43251 543 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 CRKP46108 304 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 SCNN1DP51172 638 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 PPP4CP60510 307 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 GPC2Q8N158 579 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 LCORLQ8N3X6 602 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 DPF2Q92785 391 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 USP26Q9BXU7 913 aa14.33□□□□□ -0.12
LMO3-218ENST00000538020 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
LMO3-218ENST00000538020 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms